RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TGFB1I1O43294 461 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 POMCP01189 267 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 ADSSP30520 456 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 MLH1P40692 756 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 AFF1P51825 1210 aaKnown RBP16.91■□□□□ 0.3
DDB1-218ENST00000540784 LRRC55Q6ZSA7 311 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 CEP120Q8N960 986 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 ZFP42Q96MM3 310 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 FAM193BQ96PV7 902 aaPredicted RBP16.91■□□□□ 0.3
DDB1-218ENST00000540784 NUP62CLQ9H1M0 184 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 ZNF576Q9H609 170 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 MIOSQ9NXC5 875 aa16.91■□□□□ 0.3
DDB1-218ENST00000540784 CGNQ9P2M7 1197 aaKnown RBP16.91■□□□□ 0.3
DDB1-218ENST00000540784 MRPL42Q9Y6G3 142 aaKnown RBP16.91■□□□□ 0.3
DDB1-218ENST00000540784 KIAA0391O15091 583 aaKnown RBP16.9■□□□□ 0.3
DDB1-218ENST00000540784 INPPL1O15357 1258 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 LDHAP00338 332 aaKnown RBP16.9■□□□□ 0.3
DDB1-218ENST00000540784 ACOT2P49753 483 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 GPR153Q6NV75 609 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 ARMCX5Q6P1M9 558 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 TMEM192Q8IY95 271 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 LRRC43Q8N309 656 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 GUF1Q8N442 669 aaKnown RBP16.9■□□□□ 0.3
DDB1-218ENST00000540784 TGS1Q96RS0 853 aaKnown RBP16.9■□□□□ 0.3
DDB1-218ENST00000540784 RPS6KC1Q96S38 1066 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 PCIF1Q9H4Z3 704 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 RPF1Q9H9Y2 349 aaKnown RBP16.9■□□□□ 0.3
DDB1-218ENST00000540784 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 TBC1D13Q9NVG8 400 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
DDB1-218ENST00000540784 TRIOBPQ9H2D6 2365 aa16.89■□□□□ 0.3
DDB1-218ENST00000540784 TMEM265A0A087WTH1 108 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 BIN1O00499 593 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 PDXKO00764 312 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 CLIC2O15247 247 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 PTMSP20962 102 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 BMPR1AP36894 532 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 TNFSF9P41273 254 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 PRCPP42785 496 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 SCNN1GP51170 649 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 ERVK-21P61565 698 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 ZNF697Q5TEC3 545 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 ALKAL1Q6UXT8 129 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 SMYD4Q8IYR2 804 aaPredicted RBP16.89■□□□□ 0.29
DDB1-218ENST00000540784 GSTCDQ8NEC7 633 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 CLP1Q92989 425 aaKnown RBP16.89■□□□□ 0.29
DDB1-218ENST00000540784 SAMD11Q96NU1 681 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 CBWD1Q9BRT8 395 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 FAM213AQ9BRX8 229 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 CWH43Q9H720 699 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 CERS4Q9HA82 394 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 PLEKHA5Q9HAU0 1116 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 AGPAT3Q9NRZ7 376 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 CPSF3Q9UKF6 684 aaKnown RBP16.89■□□□□ 0.29
DDB1-218ENST00000540784 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 ZMYM2Q9UBW7 1377 aa16.89■□□□□ 0.29
DDB1-218ENST00000540784 PTPRSQ13332 1948 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
DDB1-218ENST00000540784 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
DDB1-218ENST00000540784 EXTL3O43909 919 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 FAM189A1O60320 539 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 ALDH2P05091 517 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 THP07101 528 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 ALDH7A1P49419 539 aaKnown RBP16.88■□□□□ 0.29
DDB1-218ENST00000540784 FXR1P51114 621 aaKnown RBP eCLIP16.88■□□□□ 0.299e-7■■■□□ 18.4
DDB1-218ENST00000540784 POU5F1Q01860 360 aaKnown RBP16.88■□□□□ 0.29
DDB1-218ENST00000540784 STIM1Q13586 685 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 MORC3Q14149 939 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 ZBTB41Q5SVQ8 909 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 ZNF280BQ86YH2 543 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 TRIML1Q8N9V2 468 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
DDB1-218ENST00000540784 ARNTL2Q8WYA1 636 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 FAM212AQ96EL1 285 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 SAAL1Q96ER3 474 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 C17orf80Q9BSJ5 609 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 NRDE2Q9H7Z3 1164 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 KIAA1586Q9HCI6 787 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 MTUS1Q9ULD2 1270 aa16.88■□□□□ 0.29
DDB1-218ENST00000540784 SMIM28A0A1B0GU29 152 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 GOLGA8IPA6NC78 632 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 GOLGA8JA6NMD2 632 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 LACTBL1A8MY62 500 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 DDHD2O94830 711 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 RB1P06400 928 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 LAG3P18627 525 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 PPP1R2P41236 205 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 HSP90AA2PQ14568 343 aaPredicted RBP16.87■□□□□ 0.29
DDB1-218ENST00000540784 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
DDB1-218ENST00000540784 EPC2Q52LR7 807 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 COBLL1Q53SF7 1204 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 XKR4Q5GH76 650 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
DDB1-218ENST00000540784 CD302Q8IX05 232 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms