RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 NELFCDQ8IXH7 590 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 MSTO1Q9BUK6 570 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 TTYH1Q9H313 450 aaPredicted RBP13.18□□□□□ -0.3
CHD4-203ENST00000535717 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 TYW1Q9NV66 732 aaKnown RBP13.18□□□□□ -0.3
CHD4-203ENST00000535717 RMND1Q9NWS8 449 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 MIOSQ9NXC5 875 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 OGTO15294 1046 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 MEFVO15553 781 aaPredicted RBP13.17□□□□□ -0.3
CHD4-203ENST00000535717 KNOP1Q1ED39 458 aaKnown RBP13.17□□□□□ -0.3
CHD4-203ENST00000535717 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
CHD4-203ENST00000535717 LRRC43Q8N309 656 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 GSTCDQ8NEC7 633 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 RSPH1Q8WYR4 309 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 CLP1Q92989 425 aaKnown RBP13.17□□□□□ -0.3
CHD4-203ENST00000535717 ACAP3Q96P50 834 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 C17orf80Q9BSJ5 609 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 CCDC94Q9BW85 323 aaPredicted RBP13.17□□□□□ -0.3
CHD4-203ENST00000535717 MRPL9Q9BYD2 267 aaKnown RBP13.17□□□□□ -0.3
CHD4-203ENST00000535717 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 ZNF576Q9H609 170 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 CWH43Q9H720 699 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 TBC1D13Q9NVG8 400 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 MAN1B1Q9UKM7 699 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
CHD4-203ENST00000535717 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
CHD4-203ENST00000535717 TMEM265A0A087WTH1 108 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 B4GALT3O60512 393 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 POMCP01189 267 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 CLTAP09496 248 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 GARTP22102 1010 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 TNFSF9P41273 254 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 SCNN1GP51170 649 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 ERVK-21P61565 698 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 SLC10A6Q3KNW5 377 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
CHD4-203ENST00000535717 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 ALKAL1Q6UXT8 129 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 TGS1Q96RS0 853 aaKnown RBP13.16□□□□□ -0.3
CHD4-203ENST00000535717 CBWD1Q9BRT8 395 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 KCTD10Q9H3F6 313 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 SEMA6BQ9H3T3 888 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
CHD4-203ENST00000535717 CDH23Q9H251 3354 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 BIN1O00499 593 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 PTGESO14684 152 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 DDHD2O94830 711 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 MBD3O95983 291 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 BMP6P22004 513 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 BMPR1AP36894 532 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 ACOT2P49753 483 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 YARSP54577 528 aaKnown RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 SNRPFP62306 86 aaKnown RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 MORC3Q14149 939 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 KYAT1Q16773 422 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 XKR4Q5GH76 650 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 SPOUT1Q5T280 376 aaKnown RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 ARMCX5Q6P1M9 558 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 ARNTL2Q8WYA1 636 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 SAAL1Q96ER3 474 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 SNX27Q96L92 541 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 NUP62CLQ9H1M0 184 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 PCIF1Q9H4Z3 704 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 NRDE2Q9H7Z3 1164 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 TOPORSQ9NS56 1045 aaPredicted RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
CHD4-203ENST00000535717 KIAA1671Q9BY89 1806 aa13.15□□□□□ -0.3
CHD4-203ENST00000535717 TTC26A0AVF1 554 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 EPOPA6NHQ4 379 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 GOLGA8JA6NMD2 632 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 CLIC2O15247 247 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 KIF20AO95235 890 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 CXCL8P10145 99 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 CTNNB1P35222 781 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 PRCPP42785 496 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 EPC2Q52LR7 807 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 GLRA4Q5JXX5 417 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 Q7L0L9 218 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 HS2ST1Q7LGA3 356 aa13.14□□□□□ -0.31
CHD4-203ENST00000535717 COLGALT1Q8NBJ5 622 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms