RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ABCC11Q96J66 1382 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 MAP3K19Q56UN5 1328 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 CTAGE9A4FU28 777 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 TRIM75PA6NK02 468 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 TTC34A8MYJ7 566 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 EBAG9O00559 213 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 IKBKBO14920 756 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 YKT6O15498 198 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 SIN3BO75182 1162 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 CHMLP26374 656 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 PABPC4Q13310 644 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 MICALCLQ6ZW33 695 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 KRT74Q7RTS7 529 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 CCDC33Q8N5R6 958 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC30A5Q8TAD4 765 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF483Q8TF39 744 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 USP13Q92995 863 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 RUFY1Q96T51 708 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 GAL3ST1Q99999 423 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 TREX2Q9BQ50 279 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 TTLL2Q9BWV7 592 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 IRX2Q9BZI1 471 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 PUS7LQ9H0K6 701 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 UPF2Q9HAU5 1272 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 POLMQ9NP87 494 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 DNAAF2Q9NVR5 837 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 EXTL2Q9UBQ6 330 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 SAP30BPQ9UHR5 308 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 VCANP13611 3396 aa6.58□□□□□ -1.36
SMARCE1-208ENST00000474246 FASNP49327 2511 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 A0A0B4J269 797 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 LOC102724428A0A0B4J2F2 783 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 LRRC10BA6NIK2 292 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 RNF223E7ERA6 249 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 M0R2N6 131 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 TXNL1O43396 289 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 PLATP00750 562 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 MPSTP25325 297 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 SIK1P57059 783 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 BEX3Q00994 111 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 KCNB1Q14721 858 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF362Q5T0B9 420 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 TRAPPC3LQ5T215 181 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 AMIGO3Q86WK7 504 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 PCYOX1LQ8NBM8 494 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 OR52K1Q8NGK4 314 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 SCG3Q8WXD2 468 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 CASP10Q92851 521 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 ARL8AQ96BM9 186 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 ARL5BQ96KC2 179 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 CARD14Q9BXL6 1004 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 TXLNGYQ9BZA5 131 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 WDR12Q9GZL7 423 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 SERHL2Q9H4I8 314 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 ANLNQ9NQW6 1124 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 PDLIM7Q9NR12 457 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 C1orf112Q9NSG2 853 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 MOSPD1Q9UJG1 213 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 UBR3Q6ZT12 1888 aa6.57□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF541Q9H0D2 1346 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MAGEB6P1A0A0J9YX57 407 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 A0A1B0GUL7 405 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 GPR39O43194 453 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MTSS1O43312 755 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 OPA1O60313 960 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 RANBP6O60518 1105 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 DKK1O94907 266 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MYCLP12524 364 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 KPNA1P52294 538 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 PLTPP55058 493 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 PTK2Q05397 1052 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 TBC1D8BQ0IIM8 1120 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MAP7Q14244 749 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 NFE2L1Q14494 772 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CFAP100Q494V2 611 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CFAP221Q4G0U5 840 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 PLA2G2CQ5R387 149 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ZMYM1Q5SVZ6 1142 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SYDE2Q5VT97 1194 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 C8orf74Q6P047 294 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 DRICH1Q6PGQ1 229 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 UNC45BQ8IWX7 931 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 RFWD2Q8NHY2 731 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SLF1Q9BQI6 1058 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 DDX23Q9BUQ8 820 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 VPS11Q9H270 941 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 GBA2Q9HCG7 927 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 FKBP14Q9NWM8 211 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 TEKT2Q9UIF3 430 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CLEC4AQ9UMR7 237 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CHTOPQ9Y3Y2 248 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 AP1M2Q9Y6Q5 423 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 TOGARAM1Q9Y4F4 1720 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ZBED9Q6R2W3 1325 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MROH5Q6ZUA9 1318 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC22A3O75751 556 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 TBX18O95935 607 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms