RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 EMILIN2Q9BXX0 1053 aa6.65□□□□□ -1.34
VARS-222ENST00000470953 PIDD1Q9HB75 910 aa6.65□□□□□ -1.34
VARS-222ENST00000470953 CDH7Q9ULB5 785 aa6.65□□□□□ -1.34
VARS-222ENST00000470953 RBM8AQ9Y5S9 174 aaKnown RBP6.65□□□□□ -1.34
VARS-222ENST00000470953 NOTCH4Q99466 2003 aa6.65□□□□□ -1.35
VARS-222ENST00000470953 SPG11Q96JI7 2443 aa6.65□□□□□ -1.35
VARS-222ENST00000470953 BLACEA4D250 179 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 ZBTB42B2RXF5 422 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 GCOM1H8Y6P7 765 aaPredicted RBP6.64□□□□□ -1.35
VARS-222ENST00000470953 ZMYND10O75800 440 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 AKAP3O75969 853 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 POLR2MP0CAP2 368 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 NDUFV2P19404 249 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 FSHRP23945 695 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 AFF1P51825 1210 aaKnown RBP6.64□□□□□ -1.35
VARS-222ENST00000470953 AK2P54819 239 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 PTH1RQ03431 593 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 CAMK2BQ13554 666 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 GRASPQ7Z6J2 395 aaPredicted RBP6.64□□□□□ -1.35
VARS-222ENST00000470953 CATIPQ7Z7H3 387 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 PALB2Q86YC2 1186 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 TMC8Q8IU68 726 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 ENAHQ8N8S7 591 aaPredicted RBP6.64□□□□□ -1.35
VARS-222ENST00000470953 ESYT1Q9BSJ8 1104 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 PRKD2Q9BZL6 878 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 GBP3Q9H0R5 595 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 IL25Q9H293 177 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 TBC1D13Q9NVG8 400 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 MAP3K20Q9NYL2 800 aaKnown RBP6.64□□□□□ -1.35
VARS-222ENST00000470953 MBD1Q9UIS9 605 aaPredicted RBP6.64□□□□□ -1.35
VARS-222ENST00000470953 ZFP37Q9Y6Q3 630 aaPredicted RBP6.64□□□□□ -1.35
VARS-222ENST00000470953 NID2Q14112 1375 aa6.64□□□□□ -1.35
VARS-222ENST00000470953 A0A0U1RQF3 1178 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 CCDC69A6NI79 296 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 TGM5O43548 720 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 EXTL3O43909 919 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 STAM2O75886 525 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 DDHD2O94830 711 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 GLUD1P00367 558 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 CYP21A2P08686 494 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 ITGB5P18084 799 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 TNFRSF8P28908 595 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 ZNF76P36508 570 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 CRYBB1P53674 252 aaPredicted RBP6.63□□□□□ -1.35
VARS-222ENST00000470953 TRIP6Q15654 476 aaKnown RBP6.63□□□□□ -1.35
VARS-222ENST00000470953 ELF2Q15723 593 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 TOGARAM2Q6ZUX3 1019 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 TMPRSS7Q7RTY8 843 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 SLCO6A1Q86UG4 719 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 SKAP1Q86WV1 359 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 HOMER1Q86YM7 354 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 GLYCTKQ8IVS8 523 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 CTCFLQ8NI51 663 aaPredicted RBP6.63□□□□□ -1.35
VARS-222ENST00000470953 DNASE1L2Q92874 299 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 MTMR8Q96EF0 704 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 B3GALT6Q96L58 329 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 RPS6KC1Q96S38 1066 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 POLMQ9NP87 494 aaPredicted RBP6.63□□□□□ -1.35
VARS-222ENST00000470953 MRPL17Q9NRX2 175 aaKnown RBP6.63□□□□□ -1.35
VARS-222ENST00000470953 ZSWIM5Q9P217 1185 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
VARS-222ENST00000470953 INPP5FQ9Y2H2 1132 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 MTCL1Q9Y4B5 1905 aaKnown RBP6.63□□□□□ -1.35
VARS-222ENST00000470953 STK24Q9Y6E0 443 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 CENPEQ02224 2701 aa6.63□□□□□ -1.35
VARS-222ENST00000470953 ABCA2Q9BZC7 2435 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 SPTBN1Q01082 2364 aaKnown RBP6.62□□□□□ -1.35
VARS-222ENST00000470953 ICE1Q9Y2F5 2266 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 ADGRG4Q8IZF6 3080 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 BOD1L1Q8NFC6 3051 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 E7EWF7 191 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 F8W810 466 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 ZBTB5O15062 677 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 GAS2O43903 313 aaKnown RBP6.62□□□□□ -1.35
VARS-222ENST00000470953 CSDE1O75534 798 aaKnown RBP6.62□□□□□ -1.35
VARS-222ENST00000470953 OFD1O75665 1012 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 RHOBTB1O94844 696 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 ZSCAN20P17040 1043 aaPredicted RBP6.62□□□□□ -1.35
VARS-222ENST00000470953 ENGP17813 658 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 KIF5BP33176 963 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 MCM5P33992 734 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 NFKB2Q00653 900 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 TRAF1Q13077 416 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 GRM2Q14416 872 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 C6orf132Q5T0Z8 1188 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 PCNX4Q63HM2 1172 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 PDXDC2PQ6P474 469 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 LILRA6Q6PI73 481 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 SYNE3Q6ZMZ3 975 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 CYB5R4Q7L1T6 521 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 ING5Q8WYH8 240 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 MED8Q96G25 268 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 MRPL9Q9BYD2 267 aaKnown RBP6.62□□□□□ -1.35
VARS-222ENST00000470953 FSCN3Q9NQT6 498 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 MARCH5Q9NX47 278 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 SEC63Q9UGP8 760 aaKnown RBP6.62□□□□□ -1.35
VARS-222ENST00000470953 HEMK1Q9Y5R4 338 aaPredicted RBP6.62□□□□□ -1.35
VARS-222ENST00000470953 GON4LQ3T8J9 2241 aa6.62□□□□□ -1.35
VARS-222ENST00000470953 CELSR1Q9NYQ6 3014 aa6.61□□□□□ -1.35
VARS-222ENST00000470953 ABCA7Q8IZY2 2146 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms