RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 ADSSP30520 456 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 KNOP1Q1ED39 458 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 SPOUT1Q5T280 376 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 ZNF658Q5TYW1 1059 aaPredicted RBP15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 GPR153Q6NV75 609 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 ARMCX5Q6P1M9 558 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 TMEM192Q8IY95 271 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 LRRC43Q8N309 656 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 ZFP42Q96MM3 310 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 TGS1Q96RS0 853 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 ZNF576Q9H609 170 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 CWH43Q9H720 699 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 MIOSQ9NXC5 875 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 MAN1B1Q9UKM7 699 aa15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 AGO2Q9UKV8 859 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-208ENST00000466601 TGFB1I1O43294 461 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 FAM189A1O60320 539 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 MBD3O95983 291 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 POMCP01189 267 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 CLTAP09496 248 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 SCNN1GP51170 649 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 ERVK-21P61565 698 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 SNRPFP62306 86 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 RNASELQ05823 741 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 ZNF697Q5TEC3 545 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 ISM2Q6H9L7 571 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 HS2ST1Q7LGA3 356 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 GSTCDQ8NEC7 633 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 CLP1Q92989 425 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 RPS6KC1Q96S38 1066 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 CBWD1Q9BRT8 395 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 C17orf80Q9BSJ5 609 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 GTPBP4Q9BZE4 634 aaKnown RBP15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 PCIF1Q9H4Z3 704 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 CERS4Q9HA82 394 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 TBC1D13Q9NVG8 400 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 KIAA1468Q9P260 1216 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 HCSTQ9UBK5 93 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 MAPK8IP1Q9UQF2 711 aa15.77■□□□□ 0.12
DNMT3A-208ENST00000466601 LINC00271P0C7V0 271 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 TNFSF9P41273 254 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 ACOT2P49753 483 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 ZBTB41Q5SVQ8 909 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 ALKAL1Q6UXT8 129 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 SPRED2Q7Z698 418 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 SMYD4Q8IYR2 804 aaPredicted RBP15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 GUF1Q8N442 669 aaKnown RBP15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 SAMD11Q96NU1 681 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 FAM193BQ96PV7 902 aaPredicted RBP15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 CXCL16Q9H2A7 254 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 TTYH1Q9H313 450 aaPredicted RBP15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 KCTD10Q9H3F6 313 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 NRDE2Q9H7Z3 1164 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 RPF1Q9H9Y2 349 aaKnown RBP15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 AGPAT3Q9NRZ7 376 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 CGNQ9P2M7 1197 aaKnown RBP15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 CPSF3Q9UKF6 684 aaKnown RBP15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 RWDD3Q9Y3V2 267 aa15.76■□□□□ 0.11
DNMT3A-208ENST00000466601 BIN1O00499 593 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 PTGESO14684 152 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 KIAA0391O15091 583 aaKnown RBP15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 CLIC2O15247 247 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 DDHD2O94830 711 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 LDHAP00338 332 aaKnown RBP15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 CXCL8P10145 99 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 LAG3P18627 525 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 CTNNB1P35222 781 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 BMPR1AP36894 532 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 PRCPP42785 496 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 SLC10A6Q3KNW5 377 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 XKR4Q5GH76 650 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 ZNF280BQ86YH2 543 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 GOLGA5Q8TBA6 731 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 ARNTL2Q8WYA1 636 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 SAAL1Q96ER3 474 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 SNX27Q96L92 541 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 FAM213AQ9BRX8 229 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 PLEKHA5Q9HAU0 1116 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 AAASQ9NRG9 546 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 MTUS1Q9ULD2 1270 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 PLAGL2Q9UPG8 496 aa15.75■□□□□ 0.11
DNMT3A-208ENST00000466601 GOLGA8IPA6NC78 632 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 GOLGA8JA6NMD2 632 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 PDXKO00764 312 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 MEFVO15553 781 aaPredicted RBP15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 EXTL3O43909 919 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 THP07101 528 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 POU5F1Q01860 360 aaKnown RBP15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 GRIK3Q13003 919 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 MORC3Q14149 939 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 ENOX2Q16206 610 aaKnown RBP15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 EPC2Q52LR7 807 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 COBLL1Q53SF7 1204 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 CRELD2Q6UXH1 353 aaPredicted RBP15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 C12orf56Q8IXR9 622 aa15.74■□□□□ 0.11
DNMT3A-208ENST00000466601 GPD1LQ8N335 351 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms