RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PCDH11YQ9BZA8 1340 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 OVOS2A0A0G2JMS6 1433 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 OVOS2A0A0J9YW53 1432 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 OVOS2Q6IE36 1432 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MROH1Q8NDA8 1641 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 A0A1W2PRG6 482 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KANSL1LA0AUZ9 987 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FAM172BPA6NC97 362 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 BTBD18B2RXH4 712 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ENC1O14682 589 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TM9SF1O15321 606 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TBC1D4O60343 1298 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MBD4O95243 580 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MYCP01106 439 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 NTRK1P04629 796 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ITGA2BP08514 1039 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PLS3P13797 630 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 BRAFP15056 766 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 OCRLQ01968 901 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ZNF268Q14587 947 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ATP13A5Q4VNC0 1218 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 EFHC1Q5JVL4 640 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PPP1R15BQ5SWA1 713 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TMPRSS6Q8IU80 811 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ERI1Q8IV48 349 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 SIX5Q8N196 739 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TC2NQ8N9U0 490 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SHCBP1Q8NEM2 672 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PNPT1Q8TCS8 783 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 CCT6BQ92526 530 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ESR2Q92731 530 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DACT3Q96B18 629 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 NMD3Q96D46 503 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 LTV1Q96GA3 475 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 CNOT6LQ96LI5 555 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 MMS19Q96T76 1030 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TUBGCP2Q9BSJ2 902 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CARD14Q9BXL6 1004 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CLEC4MQ9H2X3 399 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 C6orf50Q9HD87 102 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 UVRAGQ9P2Y5 699 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TUBGCP4Q9UGJ1 667 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ARMCX3Q9UH62 379 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ANGEL1Q9UNK9 670 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 MED23Q9ULK4 1368 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ATP8B3O60423 1300 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ANKARQ7Z5J8 1434 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NEXMIFQ5QGS0 1516 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SMCO2A6NFE2 343 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 RASA4BC9J798 803 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 M0R3G1 203 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 RASA4O43374 803 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TSC22D2O75157 780 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 S100A6P06703 90 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PCP11498 1178 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 XRCC5P13010 732 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 CYP11B2P19099 503 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ITIH2P19823 946 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 XPAP23025 273 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 IL32P24001 234 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 HSD17B3P37058 310 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 GRIK1P39086 918 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 GPD2P43304 727 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 HK2P52789 917 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 THOP1P52888 689 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NPEPPSP55786 919 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 GEMIN4P57678 1058 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 USP46P62068 366 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRAP1Q12931 704 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 NR1I3Q14994 352 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KRT31Q15323 416 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC15A2Q16348 729 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CNPY1Q3B7I2 92 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TSGA10IPQ3SY00 556 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KRT40Q6A162 431 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KCNV1Q6PIU1 500 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM65Q6PJ69 517 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CCDC137Q6PK04 289 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 TMEM126BQ8IUX1 230 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CCDC28AQ8IWP9 274 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SVOPQ8N4V2 548 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ALLCQ8N6M5 410 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC17A8Q8NDX2 589 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NEDD1Q8NHV4 660 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DEPTORQ8TB45 409 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 BLOC1S5Q8TDH9 187 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SYTL5Q8TDW5 730 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC26A7Q8TE54 656 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 GIPC3Q8TF64 312 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 HSPH1Q92598 858 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 P2RX5Q93086 422 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC10A4Q96EP9 437 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 RMND5BQ96G75 393 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 L3MBTL3Q96JM7 780 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 DHRS1Q96LJ7 313 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FNBP1Q96RU3 617 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM31Q9BZY9 425 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PHACTR1Q9C0D0 580 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 WNT8AQ9H1J5 351 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 RSPH9Q9H1X1 276 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms