RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SCNN1GP51170 649 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 STK4Q13043 487 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 ZBTB41Q5SVQ8 909 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 SPOUT1Q5T280 376 aaKnown RBP17.66■□□□□ 0.42
SNRPB-202ENST00000438552 SCFD1Q8WVM8 642 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 CLP1Q92989 425 aaKnown RBP17.66■□□□□ 0.42
SNRPB-202ENST00000438552 CCDC47Q96A33 483 aaKnown RBP17.66■□□□□ 0.42
SNRPB-202ENST00000438552 MSTO1Q9BUK6 570 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 CCDC94Q9BW85 323 aaPredicted RBP17.66■□□□□ 0.42
SNRPB-202ENST00000438552 GBP3Q9H0R5 595 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 CXCL16Q9H2A7 254 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 CWH43Q9H720 699 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 UBN1Q9NPG3 1134 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 TBC1D13Q9NVG8 400 aa17.66■□□□□ 0.42
SNRPB-202ENST00000438552 HOOK1Q9UJC3 728 aaKnown RBP17.66■□□□□ 0.42
SNRPB-202ENST00000438552 A0A0B4J269 797 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 GOLGA6L22H0YM25 854 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 FAM189A1O60320 539 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 B4GALT3O60512 393 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 POMCP01189 267 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 PBX3P40426 434 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 ERVK-21P61565 698 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 RNASELQ05823 741 aaKnown RBP17.65■□□□□ 0.42
SNRPB-202ENST00000438552 KCNB1Q14721 858 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 DEFB123Q8N688 67 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 ZNF507Q8TCN5 953 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 GDPD5Q8WTR4 605 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 RPS6KC1Q96S38 1066 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 SEMA6BQ9H3T3 888 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 PLAGL2Q9UPG8 496 aa17.65■□□□□ 0.42
SNRPB-202ENST00000438552 DLL1O00548 723 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 OGTO15294 1046 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 INPPL1O15357 1258 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 MEFVO15553 781 aaPredicted RBP17.64■□□□□ 0.41
SNRPB-202ENST00000438552 ZC3H11AO75152 810 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRPB-202ENST00000438552 ADSSP30520 456 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 TNFSF9P41273 254 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 PSMD2Q13200 908 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 BMT2Q1RMZ1 405 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 EPC2Q52LR7 807 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 COLGALT1Q8NBJ5 622 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 FBXO22Q8NEZ5 403 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 RSPH1Q8WYR4 309 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 POMGNT1Q8WZA1 660 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 SMARCE1Q969G3 411 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 SNX27Q96L92 541 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 PRDM12Q9H4Q4 367 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 MIOSQ9NXC5 875 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 PCDHA5Q9Y5H7 936 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 STYXL1Q9Y6J8 313 aa17.64■□□□□ 0.41
SNRPB-202ENST00000438552 RFXAPO00287 272 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 PTGESO14684 152 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 SMC2O95347 1197 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 CXCL8P10145 99 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 LAG3P18627 525 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 YARSP54577 528 aaKnown RBP17.63■□□□□ 0.41
SNRPB-202ENST00000438552 GLRA4Q5JXX5 417 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 ARMCX5Q6P1M9 558 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 ZNF280BQ86YH2 543 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 ELOA2Q8IYF1 753 aaPredicted RBP17.63■□□□□ 0.41
SNRPB-202ENST00000438552 SMYD4Q8IYR2 804 aaPredicted RBP17.63■□□□□ 0.41
SNRPB-202ENST00000438552 GSTCDQ8NEC7 633 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 SPATA20Q8TB22 786 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 SAAL1Q96ER3 474 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 SAMD11Q96NU1 681 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 CBWD1Q9BRT8 395 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 NRDE2Q9H7Z3 1164 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 DNAJB4Q9UDY4 337 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 AGO2Q9UKV8 859 aaKnown RBP17.63■□□□□ 0.41
SNRPB-202ENST00000438552 RWDD3Q9Y3V2 267 aa17.63■□□□□ 0.41
SNRPB-202ENST00000438552 MYO9BQ13459 2157 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 TGFB1I1O43294 461 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 DDHD2O94830 711 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 BMPR1AP36894 532 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 ACOT2P49753 483 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 GRIK3Q13003 919 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 CAMK4Q16566 473 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 SLFN12LQ6IEE8 588 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 ZSWIM2Q8NEG5 633 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 GPT2Q8TD30 523 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 ZNF558Q96NG5 402 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 GUCD1Q96NT3 240 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 ACAP3Q96P50 834 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 GSDMAQ96QA5 445 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 PCIF1Q9H4Z3 704 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 AGPAT3Q9NRZ7 376 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 TOPORSQ9NS56 1045 aaPredicted RBP17.62■□□□□ 0.41
SNRPB-202ENST00000438552 RMND1Q9NWS8 449 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 MAPK8IP1Q9UQF2 711 aa17.62■□□□□ 0.41
SNRPB-202ENST00000438552 C5orf67F2Z3F1 127 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 CLTAP09496 248 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 GARTP22102 1010 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 BCAR1P56945 870 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 ENOX2Q16206 610 aaKnown RBP17.61■□□□□ 0.41
SNRPB-202ENST00000438552 KNOP1Q1ED39 458 aaKnown RBP17.61■□□□□ 0.41
SNRPB-202ENST00000438552 SLC10A6Q3KNW5 377 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 KCNT2Q6UVM3 1135 aa17.61■□□□□ 0.41
SNRPB-202ENST00000438552 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms