RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SPRED2Q7Z698 418 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 GSTCDQ8NEC7 633 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 ACAP3Q96P50 834 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 CXCL16Q9H2A7 254 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 MIOSQ9NXC5 875 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 MAPK8IP1Q9UQF2 711 aa26.73■■□□□ 1.87
VEGFA-209ENST00000425836 GARTP22102 1010 aa26.72■■□□□ 1.87
VEGFA-209ENST00000425836 ZBTB41Q5SVQ8 909 aa26.72■■□□□ 1.87
VEGFA-209ENST00000425836 ZNF658Q5TYW1 1059 aaPredicted RBP26.72■■□□□ 1.87
VEGFA-209ENST00000425836 SMYD4Q8IYR2 804 aaPredicted RBP26.72■■□□□ 1.87
VEGFA-209ENST00000425836 LRRC43Q8N309 656 aa26.72■■□□□ 1.87
VEGFA-209ENST00000425836 CBWD1Q9BRT8 395 aa26.72■■□□□ 1.87
VEGFA-209ENST00000425836 MRPL9Q9BYD2 267 aaKnown RBP26.72■■□□□ 1.87
VEGFA-209ENST00000425836 TBC1D13Q9NVG8 400 aa26.72■■□□□ 1.87
VEGFA-209ENST00000425836 KIAA1468Q9P260 1216 aa26.72■■□□□ 1.87
VEGFA-209ENST00000425836 AGO2Q9UKV8 859 aaKnown RBP26.72■■□□□ 1.87
VEGFA-209ENST00000425836 MBD3O95983 291 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 ISM2Q6H9L7 571 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 URGCPQ8TCY9 931 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 CLP1Q92989 425 aaKnown RBP26.71■■□□□ 1.87
VEGFA-209ENST00000425836 NUP62CLQ9H1M0 184 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 CWH43Q9H720 699 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 AGPAT3Q9NRZ7 376 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 KANSL3Q9P2N6 904 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 TMEM265A0A087WTH1 108 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 MEFVO15553 781 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-209ENST00000425836 POMCP01189 267 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 CLTAP09496 248 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 TNFSF9P41273 254 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 SCNN1GP51170 649 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 YARSP54577 528 aaKnown RBP26.71■■□□□ 1.87
VEGFA-209ENST00000425836 KYAT1Q16773 422 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 ARMCX5Q6P1M9 558 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 GUF1Q8N442 669 aaKnown RBP26.71■■□□□ 1.87
VEGFA-209ENST00000425836 TTYH1Q9H313 450 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-209ENST00000425836 KCTD10Q9H3F6 313 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 ZNF576Q9H609 170 aa26.71■■□□□ 1.87
VEGFA-209ENST00000425836 KIF20AO95235 890 aa26.7■■□□□ 1.86
VEGFA-209ENST00000425836 ERVK-21P61565 698 aa26.7■■□□□ 1.86
VEGFA-209ENST00000425836 SNRPFP62306 86 aaKnown RBP26.7■■□□□ 1.86
VEGFA-209ENST00000425836 GPR153Q6NV75 609 aa26.7■■□□□ 1.86
VEGFA-209ENST00000425836 ALKAL1Q6UXT8 129 aa26.7■■□□□ 1.86
VEGFA-209ENST00000425836 TGS1Q96RS0 853 aaKnown RBP26.7■■□□□ 1.86
VEGFA-209ENST00000425836 C17orf80Q9BSJ5 609 aa26.7■■□□□ 1.86
VEGFA-209ENST00000425836 PCIF1Q9H4Z3 704 aa26.7■■□□□ 1.86
VEGFA-209ENST00000425836 TOPORSQ9NS56 1045 aaPredicted RBP26.7■■□□□ 1.86
VEGFA-209ENST00000425836 CPSF3Q9UKF6 684 aaKnown RBP26.7■■□□□ 1.86
VEGFA-209ENST00000425836 BIN1O00499 593 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 ACOT2P49753 483 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 MORC3Q14149 939 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 SLC10A6Q3KNW5 377 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 XKR4Q5GH76 650 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 HS2ST1Q7LGA3 356 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 ZSWIM2Q8NEG5 633 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 SNX27Q96L92 541 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 RPS6KC1Q96S38 1066 aa26.69■■□□□ 1.86
VEGFA-209ENST00000425836 GTPBP4Q9BZE4 634 aaKnown RBP26.69■■□□□ 1.86
VEGFA-209ENST00000425836 PTGESO14684 152 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 BMP6P22004 513 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 PRCPP42785 496 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 COBLL1Q53SF7 1204 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 CRELD2Q6UXH1 353 aaPredicted RBP26.68■■□□□ 1.86
VEGFA-209ENST00000425836 ZNF280BQ86YH2 543 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 SAAL1Q96ER3 474 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 CERS4Q9HA82 394 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 CGNQ9P2M7 1197 aaKnown RBP26.68■■□□□ 1.86
VEGFA-209ENST00000425836 PLAGL2Q9UPG8 496 aa26.68■■□□□ 1.86
VEGFA-209ENST00000425836 CLIC2O15247 247 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 DDHD2O94830 711 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 CXCL8P10145 99 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 RNASELQ05823 741 aaKnown RBP26.67■■□□□ 1.86
VEGFA-209ENST00000425836 ENOX2Q16206 610 aaKnown RBP26.67■■□□□ 1.86
VEGFA-209ENST00000425836 SPOUT1Q5T280 376 aaKnown RBP26.67■■□□□ 1.86
VEGFA-209ENST00000425836 ZNF697Q5TEC3 545 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 SEMA6BQ9H3T3 888 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 NRDE2Q9H7Z3 1164 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 RPF1Q9H9Y2 349 aaKnown RBP26.67■■□□□ 1.86
VEGFA-209ENST00000425836 MTUS1Q9ULD2 1270 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 PDXKO00764 312 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 B4GALT3O60512 393 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 BMPR1AP36894 532 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 GOLGA5Q8TBA6 731 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 FAM213AQ9BRX8 229 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 PLEKHA5Q9HAU0 1116 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 HSPBP1Q9NZL4 362 aa26.67■■□□□ 1.86
VEGFA-209ENST00000425836 GBF1Q92538 1859 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 SMIM28A0A1B0GU29 152 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 GOLGA8IPA6NC78 632 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 GOLGA8JA6NMD2 632 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 KIAA0391O15091 583 aaKnown RBP26.66■■□□□ 1.86
VEGFA-209ENST00000425836 LDHAP00338 332 aaKnown RBP26.66■■□□□ 1.86
VEGFA-209ENST00000425836 GRIK3Q13003 919 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 EPC2Q52LR7 807 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 C12orf56Q8IXR9 622 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 ARNTL2Q8WYA1 636 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 SAMD11Q96NU1 681 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 CNTN3Q9P232 1028 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 RWDD3Q9Y3V2 267 aa26.66■■□□□ 1.86
VEGFA-209ENST00000425836 TTC26A0AVF1 554 aa26.65■■□□□ 1.86
VEGFA-209ENST00000425836 EXTL3O43909 919 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms