RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 TBC1D13Q9NVG8 400 aa18.78■□□□□ 0.6
PTCHD3P3-201ENST00000403073 MAPK8IP1Q9UQF2 711 aa18.78■□□□□ 0.6
PTCHD3P3-201ENST00000403073 TRIOBPQ9H2D6 2365 aa18.78■□□□□ 0.6
PTCHD3P3-201ENST00000403073 TGFB1I1O43294 461 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 TNFSF9P41273 254 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 SCNN1GP51170 649 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 ERVK-21P61565 698 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 BMT2Q1RMZ1 405 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 ISM2Q6H9L7 571 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 GPR153Q6NV75 609 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 ZNF280BQ86YH2 543 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 LRRC43Q8N309 656 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 ARNTL2Q8WYA1 636 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 POMGNT1Q8WZA1 660 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 CLP1Q92989 425 aaKnown RBP18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 GSDMAQ96QA5 445 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 MRPL9Q9BYD2 267 aaKnown RBP18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 RMND1Q9NWS8 449 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 ZMYM2Q9UBW7 1377 aa18.77■□□□□ 0.6
PTCHD3P3-201ENST00000403073 TMEM265A0A087WTH1 108 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 RFXAPO00287 272 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 OGTO15294 1046 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 INPPL1O15357 1258 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 MEFVO15553 781 aaPredicted RBP18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 FAM189A1O60320 539 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 DDHD2O94830 711 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 BMPR1AP36894 532 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 YARSP54577 528 aaKnown RBP18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 GRIN2CQ14957 1233 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 KNOP1Q1ED39 458 aaKnown RBP18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 SMYD4Q8IYR2 804 aaPredicted RBP18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 ZSWIM2Q8NEG5 633 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CBWD1Q9BRT8 395 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 GBP3Q9H0R5 595 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 PCIF1Q9H4Z3 704 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 KANSL3Q9P2N6 904 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 MAN1B1Q9UKM7 699 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 AGO2Q9UKV8 859 aaKnown RBP18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 PLAGL2Q9UPG8 496 aa18.76■□□□□ 0.59
PTCHD3P3-201ENST00000403073 UBE4BO95155 1302 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 EPOPA6NHQ4 379 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 PTGESO14684 152 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 B4GALT3O60512 393 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CLTAP09496 248 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 MCM4P33991 863 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CTNNB1P35222 781 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 ACOT2P49753 483 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 SLC10A6Q3KNW5 377 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 DEFB123Q8N688 67 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 SAAL1Q96ER3 474 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CLSTN2Q9H4D0 955 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 NRDE2Q9H7Z3 1164 aa18.75■□□□□ 0.59
PTCHD3P3-201ENST00000403073 LAMA2P24043 3122 aaKnown RBP18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 GOLGA8IPA6NC78 632 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 GOLGA8JA6NMD2 632 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CLIC2O15247 247 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CXCL8P10145 99 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 GARTP22102 1010 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 PBX3P40426 434 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 GLRA4Q5JXX5 417 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 ARMCX5Q6P1M9 558 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 ALKAL1Q6UXT8 129 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 COLGALT1Q8NBJ5 622 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 RSPH1Q8WYR4 309 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 FAM193BQ96PV7 902 aaPredicted RBP18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 RPS6KC1Q96S38 1066 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 FAM213AQ9BRX8 229 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 PRDM12Q9H4Q4 367 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 AGPAT3Q9NRZ7 376 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 TOPORSQ9NS56 1045 aaPredicted RBP18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 DNAJB4Q9UDY4 337 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CPSF3Q9UKF6 684 aaKnown RBP18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 LAMA3Q16787 3333 aa18.74■□□□□ 0.59
PTCHD3P3-201ENST00000403073 MYH11P35749 1972 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 SMIM28A0A1B0GU29 152 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 BIN1O00499 593 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 ZC3H11AO75152 810 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 LAG3P18627 525 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 BCAR1P56945 870 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 ENOX2Q16206 610 aaKnown RBP18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 KYAT1Q16773 422 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 XKR4Q5GH76 650 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 KCNT2Q6UVM3 1135 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 CRELD2Q6UXH1 353 aaPredicted RBP18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 FBXO22Q8NEZ5 403 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 SNX27Q96L92 541 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 SAMD11Q96NU1 681 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 KCTD10Q9H3F6 313 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 RPF1Q9H9Y2 349 aaKnown RBP18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 AAASQ9NRG9 546 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 KIAA1468Q9P260 1216 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 RWDD3Q9Y3V2 267 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 PCDHB12Q9Y5F1 795 aa18.73■□□□□ 0.59
PTCHD3P3-201ENST00000403073 LACTBL1A8MY62 500 aa18.72■□□□□ 0.59
PTCHD3P3-201ENST00000403073 NT5C1B-RDH14C9J2C7 533 aa18.72■□□□□ 0.59
PTCHD3P3-201ENST00000403073 TULP1O00294 542 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms