RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ZMYM2Q9UBW7 1377 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 OGTO15294 1046 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 INPPL1O15357 1258 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 ADSSP30520 456 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 AFF1P51825 1210 aaKnown RBP20.96■□□□□ 0.95
HOXA9-202ENST00000396345 KYAT1Q16773 422 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 KNOP1Q1ED39 458 aaKnown RBP20.96■□□□□ 0.95
HOXA9-202ENST00000396345 SEZ6Q53EL9 994 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 SPOUT1Q5T280 376 aaKnown RBP20.96■□□□□ 0.95
HOXA9-202ENST00000396345 CLP1Q92989 425 aaKnown RBP20.96■□□□□ 0.95
HOXA9-202ENST00000396345 ZFP42Q96MM3 310 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 TTYH1Q9H313 450 aaPredicted RBP20.96■□□□□ 0.95
HOXA9-202ENST00000396345 CWH43Q9H720 699 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 CERS4Q9HA82 394 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 TBC1D13Q9NVG8 400 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 HCSTQ9UBK5 93 aa20.96■□□□□ 0.95
HOXA9-202ENST00000396345 AGO2Q9UKV8 859 aaKnown RBP20.96■□□□□ 0.95
HOXA9-202ENST00000396345 KIF20AO95235 890 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 POMCP01189 267 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 GARTP22102 1010 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 MCM4P33991 863 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 SCNN1GP51170 649 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 ERVK-21P61565 698 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 RNASELQ05823 741 aaKnown RBP20.95■□□□□ 0.94
HOXA9-202ENST00000396345 SPRED2Q7Z698 418 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 GPT2Q8TD30 523 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 SAMD11Q96NU1 681 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 RPS6KC1Q96S38 1066 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 C17orf80Q9BSJ5 609 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 SEMA6BQ9H3T3 888 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 CLSTN2Q9H4D0 955 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 TOPORSQ9NS56 1045 aaPredicted RBP20.95■□□□□ 0.94
HOXA9-202ENST00000396345 MIOSQ9NXC5 875 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 MTUS1Q9ULD2 1270 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 RWDD3Q9Y3V2 267 aa20.95■□□□□ 0.94
HOXA9-202ENST00000396345 NLRC5Q86WI3 1866 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 TGFB1I1O43294 461 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 CLTAP09496 248 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 LINC00271P0C7V0 271 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 BMPR1AP36894 532 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 ARNTL2Q8WYA1 636 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 GTPBP4Q9BZE4 634 aaKnown RBP20.94■□□□□ 0.94
HOXA9-202ENST00000396345 AAASQ9NRG9 546 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 MAN1B1Q9UKM7 699 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 KIAA1671Q9BY89 1806 aa20.94■□□□□ 0.94
HOXA9-202ENST00000396345 RALGAPA2Q2PPJ7 1873 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 FAM189A1O60320 539 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 LAG3P18627 525 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 CTNNB1P35222 781 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 TNFSF9P41273 254 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 SNRPFP62306 86 aaKnown RBP20.93■□□□□ 0.94
HOXA9-202ENST00000396345 EPC2Q52LR7 807 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 ZBTB41Q5SVQ8 909 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 ZNF658Q5TYW1 1059 aaPredicted RBP20.93■□□□□ 0.94
HOXA9-202ENST00000396345 ARMCX5Q6P1M9 558 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 HS2ST1Q7LGA3 356 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 SMYD4Q8IYR2 804 aaPredicted RBP20.93■□□□□ 0.94
HOXA9-202ENST00000396345 GSTCDQ8NEC7 633 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 SNX27Q96L92 541 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 FAM161BQ96MY7 647 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 FAM193BQ96PV7 902 aaPredicted RBP20.93■□□□□ 0.94
HOXA9-202ENST00000396345 CBWD1Q9BRT8 395 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 NUP62CLQ9H1M0 184 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 CXCL16Q9H2A7 254 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 PCIF1Q9H4Z3 704 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 AGPAT3Q9NRZ7 376 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 CGNQ9P2M7 1197 aaKnown RBP20.93■□□□□ 0.94
HOXA9-202ENST00000396345 MAPK8IP1Q9UQF2 711 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 CITO14578 2027 aa20.93■□□□□ 0.94
HOXA9-202ENST00000396345 TDRD15B5MCY1 1934 aaKnown RBP20.92■□□□□ 0.94
HOXA9-202ENST00000396345 TRIP11Q15643 1979 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 MBD3O95983 291 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 ACOT2P49753 483 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 GRIK3Q13003 919 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 SLC10A6Q3KNW5 377 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 ISM2Q6H9L7 571 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 ALKAL1Q6UXT8 129 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 Q7L0L9 218 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 ZNF280BQ86YH2 543 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 GUF1Q8N442 669 aaKnown RBP20.92■□□□□ 0.94
HOXA9-202ENST00000396345 COLGALT1Q8NBJ5 622 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 FBXO22Q8NEZ5 403 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 GOLGA5Q8TBA6 731 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 NRDE2Q9H7Z3 1164 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 RPF1Q9H9Y2 349 aaKnown RBP20.92■□□□□ 0.94
HOXA9-202ENST00000396345 KIAA1468Q9P260 1216 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 CPSF3Q9UKF6 684 aaKnown RBP20.92■□□□□ 0.94
HOXA9-202ENST00000396345 PCDHB12Q9Y5F1 795 aa20.92■□□□□ 0.94
HOXA9-202ENST00000396345 PTGESO14684 152 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 KIAA0391O15091 583 aaKnown RBP20.91■□□□□ 0.94
HOXA9-202ENST00000396345 CLIC2O15247 247 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 ZC3H11AO75152 810 aaKnown RBP eCLIP20.91■□□□□ 0.94
HOXA9-202ENST00000396345 DDHD2O94830 711 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 LDHAP00338 332 aaKnown RBP20.91■□□□□ 0.94
HOXA9-202ENST00000396345 RB1P06400 928 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 THP07101 528 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 CXCL8P10145 99 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 GRIN2CQ14957 1233 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 ENOX2Q16206 610 aaKnown RBP20.91■□□□□ 0.94
HOXA9-202ENST00000396345 XKR4Q5GH76 650 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms