RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 GYG2O15488 501 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 EXOC3O60645 756 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ZC3H11AO75152 810 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 NQO1P15559 274 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ITIH2P19823 946 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CDC27P30260 824 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 GNL1P36915 607 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CCNG1P51959 295 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 PDE1CQ14123 709 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 TCP11X2Q5H9J9 407 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 TMEM110Q86TL2 294 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 DRAXINQ8NBI3 349 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 QKIQ96PU8 341 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 DDX47Q9H0S4 455 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 LOC102724159A0A0B4J2E5 919 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 RPN1P04843 607 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CALB1P05937 261 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 USP17L8P0C7I0 530 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CTCFP49711 727 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 PWP2Q15269 919 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 KYAT1Q16773 422 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ZCWPW2Q504Y3 356 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ELMOD1Q8N336 334 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ERGIC2Q96RQ1 377 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 MEIS3Q99687 375 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 AFG3L2Q9Y4W6 797 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CEP250Q9BV73 2442 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ESYT2A0FGR8 921 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 H0YJX3 145 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 IGF2BP3O00425 579 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ARL4CP56559 192 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ABCE1P61221 599 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 MAPK6Q16659 721 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 SGMS1Q86VZ5 419 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 MYOCDQ8IZQ8 938 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 BTBD9Q96Q07 612 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 RABL2AQ9UBK7 228 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 SLC24A2Q9UI40 661 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 RABL2BQ9UNT1 228 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 RWDD3Q9Y3V2 267 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 HOXB8P17481 243 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 NR1H2P55055 460 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ARPC4P59998 168 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 SLC45A4Q5BKX6 768 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CCNI2Q6ZMN8 369 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 METTL23Q86XA0 190 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF677Q86XU0 584 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 DBNDD1Q9H9R9 158 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 PLGRKTQ9HBL7 147 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 VPS45Q9NRW7 570 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 LMCD1Q9NZU5 365 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ARMCX3Q9UH62 379 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF804BA4D1E1 1349 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 BTBD19C9JJ37 291 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 PJA2O43164 708 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 C7P10643 843 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 GUCY2DQ02846 1103 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 EN1Q05925 392 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 MTA1Q13330 715 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 C6orf10Q5SRN2 563 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 FMR1NBQ8N0W7 255 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 SNIP1Q8TAD8 396 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 NAT9Q9BTE0 207 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 HERC5Q9UII4 1024 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 LEMD3Q9Y2U8 911 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 SPATA31A6Q5VVP1 1343 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 MYO3BQ8WXR4 1341 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 WNT7AO00755 349 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 SORBS3O60504 671 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 EFCAB14O75071 495 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 DNAJB2P25686 324 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 SCTRP47872 440 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 DPYSQ14117 519 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 DCAF17Q5H9S7 520 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-203ENST00000381196 TTC27Q6P3X3 843 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 FASTKD5Q7L8L6 764 aaKnown RBP5.15□□□□□ -1.58
PTPRD-203ENST00000381196 PDIK1LQ8N165 341 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 PSMA8Q8TAA3 256 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 LENG1Q96BZ8 264 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-203ENST00000381196 LRMDAQ9H2I8 198 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 KIAA1586Q9HCI6 787 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 ANAPC5Q9UJX4 755 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 CEP290O15078 2479 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 KNTC1P50748 2209 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 C10orf71Q711Q0 1435 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 EYA4O95677 639 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 ADRA2BP18089 450 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 TNFAIP3P21580 790 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 S100A5P33763 92 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 FCHO2Q0JRZ9 810 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 SCRN1Q12765 414 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 KRT40Q6A162 431 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 B3GNT6Q6ZMB0 384 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 SCAIQ8N9R8 606 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 P2RX5Q93086 422 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 MKNK1Q9BUB5 465 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 VPS16Q9H269 839 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 HMG20AQ9NP66 347 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 STARD13Q9Y3M8 1113 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms