RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 LINC01553A4QN01 128 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 CLDN3O15551 220 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 MEFVO15553 781 aaPredicted RBP20.24■□□□□ 0.83
CDX4-201ENST00000373514 FAM189A1O60320 539 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 OFD1O75665 1012 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 CCDC192P0DO97 292 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 ADSSP30520 456 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 PSMD2Q13200 908 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 BMT2Q1RMZ1 405 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 PPP2R2DQ66LE6 453 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 CMTR2Q8IYT2 770 aaKnown RBP20.24■□□□□ 0.83
CDX4-201ENST00000373514 ABI1Q8IZP0 508 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 GAD1Q99259 594 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 TMEM117Q9H0C3 514 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 KIAA1468Q9P260 1216 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 MAN1B1Q9UKM7 699 aa20.24■□□□□ 0.83
CDX4-201ENST00000373514 BIN1O00499 593 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 HOXA2O43364 376 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 B4GALT3O60512 393 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 SMC2O95347 1197 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 LINC00271P0C7V0 271 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 GRM5P41594 1212 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDX4-201ENST00000373514 SCNN1GP51170 649 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 TAP1Q03518 808 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 TYRO3Q06418 890 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 SASS6Q6UVJ0 657 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 LRRC55Q6ZSA7 311 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 GSDMAQ96QA5 445 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 CBWD1Q9BRT8 395 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 MSTO1Q9BUK6 570 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 TMEM206Q9H813 350 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
CDX4-201ENST00000373514 MTUS1Q9ULD2 1270 aa20.23■□□□□ 0.83
CDX4-201ENST00000373514 A0A0B4J269 797 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 ARL5CA6NH57 179 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 TGFB1I1O43294 461 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 POMCP01189 267 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 GLB1LQ6UWU2 654 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 POMGNT1Q8WZA1 660 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 SAAL1Q96ER3 474 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 PCIF1Q9H4Z3 704 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 TBC1D13Q9NVG8 400 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 MIOSQ9NXC5 875 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 PLAGL2Q9UPG8 496 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 STYXL1Q9Y6J8 313 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 CXCL8P10145 99 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 NOMO2Q5JPE7 1267 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 GLRA4Q5JXX5 417 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
CDX4-201ENST00000373514 HACE1Q8IYU2 909 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 LRRC43Q8N309 656 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 FIBCD1Q8N539 461 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 GSTCDQ8NEC7 633 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 C17orf80Q9BSJ5 609 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 CCDC94Q9BW85 323 aaPredicted RBP20.22■□□□□ 0.83
CDX4-201ENST00000373514 GBP3Q9H0R5 595 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 TTYH1Q9H313 450 aaPredicted RBP20.22■□□□□ 0.83
CDX4-201ENST00000373514 CWH43Q9H720 699 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 SLC28A3Q9HAS3 691 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 TYW1Q9NV66 732 aaKnown RBP20.22■□□□□ 0.83
CDX4-201ENST00000373514 RMND1Q9NWS8 449 aa20.22■□□□□ 0.83
CDX4-201ENST00000373514 CHD7Q9P2D1 2997 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 PTGESO14684 152 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 CLIC2O15247 247 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 OGTO15294 1046 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 BMP6P22004 513 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 PBX3P40426 434 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 KNOP1Q1ED39 458 aaKnown RBP20.21■□□□□ 0.83
CDX4-201ENST00000373514 ZNF658Q5TYW1 1059 aaPredicted RBP20.21■□□□□ 0.83
CDX4-201ENST00000373514 ARMCX5Q6P1M9 558 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 AGPAT3Q9NRZ7 376 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 AGO2Q9UKV8 859 aaKnown RBP20.21■□□□□ 0.83
CDX4-201ENST00000373514 GIT1Q9Y2X7 761 aa20.21■□□□□ 0.83
CDX4-201ENST00000373514 GOLGA8IPA6NC78 632 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 GOLGA8JA6NMD2 632 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 ACOT2P49753 483 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 Q7L0L9 218 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 NOC3LQ8WTT2 800 aaKnown RBP20.2■□□□□ 0.82
CDX4-201ENST00000373514 SNX27Q96L92 541 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 FAM161BQ96MY7 647 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 RBSNQ9H1K0 784 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 KCTD10Q9H3F6 313 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 CACNG4Q9UBN1 327 aa20.2■□□□□ 0.82
CDX4-201ENST00000373514 CDH23Q9H251 3354 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 EPOPA6NHQ4 379 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 INPPL1O15357 1258 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 PRCPP42785 496 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 MORC3Q14149 939 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 SLFN12LQ6IEE8 588 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 CRELD2Q6UXH1 353 aaPredicted RBP20.19■□□□□ 0.82
CDX4-201ENST00000373514 ZNF280BQ86YH2 543 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 TMEM130Q8N3G9 435 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 URGCPQ8TCY9 931 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 ACAP3Q96P50 834 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 RPS6KC1Q96S38 1066 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 MRPL9Q9BYD2 267 aaKnown RBP20.19■□□□□ 0.82
CDX4-201ENST00000373514 ZNF576Q9H609 170 aa20.19■□□□□ 0.82
CDX4-201ENST00000373514 DNAJB4Q9UDY4 337 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms