RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SEZ6Q53EL9 994 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 SLC39A4Q6P5W5 647 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 NLRC5Q86WI3 1866 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 FBXO22Q8NEZ5 403 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 POMGNT1Q8WZA1 660 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 ACAP3Q96P50 834 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 PRDM12Q9H4Q4 367 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 CHD9Q3L8U1 2897 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 SMC2O95347 1197 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 BMPR1AP36894 532 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 SCNN1GP51170 649 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 STK4Q13043 487 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 NELFCDQ8IXH7 590 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 ERCC4Q92889 916 aaPredicted RBP22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 HAPLN2Q9GZV7 340 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 CWH43Q9H720 699 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 TOPORSQ9NS56 1045 aaPredicted RBP22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 PCDHB12Q9Y5F1 795 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 ZC3H11AO75152 810 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMARCB1-202ENST00000344921 LAG3P18627 525 aa22.73■■□□□ 1.23
SMARCB1-202ENST00000344921 EPM2AIP1Q7L775 607 aaPredicted RBP22.73■■□□□ 1.23
SMARCB1-202ENST00000344921 ZNF507Q8TCN5 953 aa22.73■■□□□ 1.23
SMARCB1-202ENST00000344921 SMARCE1Q969G3 411 aa22.73■■□□□ 1.23
SMARCB1-202ENST00000344921 LMBRD1Q9NUN5 540 aa22.73■■□□□ 1.23
SMARCB1-202ENST00000344921 OGTO15294 1046 aa22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 RHOBTB3O94955 611 aa22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 SCFD1Q8WVM8 642 aa22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 RMND1Q9NWS8 449 aa22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 MIOSQ9NXC5 875 aa22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 AGO2Q9UKV8 859 aaKnown RBP22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 MYO9BQ13459 2157 aa22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 UBE4BO95155 1302 aa22.72■■□□□ 1.23
SMARCB1-202ENST00000344921 A0A0B4J269 797 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 RFXAPO00287 272 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 LINC00271P0C7V0 271 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 ALDH7A1P49419 539 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 KCNB1Q14721 858 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 KIAA0895Q8NCT3 520 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 PCDHA5Q9Y5H7 936 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 RALGAPA2Q2PPJ7 1873 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 CHD7Q9P2D1 2997 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 PBX3P40426 434 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 KYAT1Q16773 422 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 ARMCX5Q6P1M9 558 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 KCNT2Q6UVM3 1135 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 ZNF280BQ86YH2 543 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 ELOA2Q8IYF1 753 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 COLGALT1Q8NBJ5 622 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 NOC3LQ8WTT2 800 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 ZNF558Q96NG5 402 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 GAS2L1Q99501 681 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 C11orf84Q9BUA3 381 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 PLVAPQ9BX97 442 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 NRDE2Q9H7Z3 1164 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 MTMR10Q9NXD2 777 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 STYXL1Q9Y6J8 313 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 TDRD15B5MCY1 1934 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 KIAA1671Q9BY89 1806 aa22.71■■□□□ 1.23
SMARCB1-202ENST00000344921 EPOPA6NHQ4 379 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 TULP1O00294 542 aaPredicted RBP22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 RB1P06400 928 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 THP07101 528 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 CLTAP09496 248 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 GRIK3Q13003 919 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 GPM6BQ13491 265 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 GSTCDQ8NEC7 633 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 GDPD5Q8WTR4 605 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 GSDMAQ96QA5 445 aa22.7■■□□□ 1.22
SMARCB1-202ENST00000344921 ZMYM2Q9UBW7 1377 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 INPPL1O15357 1258 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 DDHD2O94830 711 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 KIF20AO95235 890 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 ADSSP30520 456 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 HOXD13P35453 343 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 TNFSF9P41273 254 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 ACOT2P49753 483 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 BCAR1P56945 870 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 CAMK4Q16566 473 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 KNOP1Q1ED39 458 aaKnown RBP22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 GLRA4Q5JXX5 417 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 HS2ST1Q7LGA3 356 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 KLHL23Q8NBE8 558 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 CDX2Q99626 313 aaPredicted RBP22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 PCIF1Q9H4Z3 704 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 RPF1Q9H9Y2 349 aaKnown RBP22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 DNAJB4Q9UDY4 337 aa22.69■■□□□ 1.22
SMARCB1-202ENST00000344921 NT5C1B-RDH14C9J2C7 533 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 C5orf67F2Z3F1 127 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 CXCL8P10145 99 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 GARTP22102 1010 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 ZBTB41Q5SVQ8 909 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 MYLIPQ8WY64 445 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 FAM212AQ96EL1 285 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 CXCL16Q9H2A7 254 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 PLAGL2Q9UPG8 496 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 CITO14578 2027 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 H3BNC9 293 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 PTGESO14684 152 aa22.68■■□□□ 1.22
SMARCB1-202ENST00000344921 LDHAP00338 332 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms