RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	FARP2	O94887	1054 aa	Predicted RBP	11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	LDHA	P00338	332 aa	Known RBP	11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	ADRB2	P07550	413 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	DLAT	P10515	647 aa	Known RBP	11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	STAT5B	P51692	787 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	ITIH3	Q06033	890 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	CYP24A1	Q07973	514 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	BIRC3	Q13489	604 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	TFDP1	Q14186	410 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	KIF22	Q14807	665 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	PWP2	Q15269	919 aa	Known RBP	11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	EPC2	Q52LR7	807 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	HSP90B2P	Q58FF3	399 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	LDLRAD1	Q5T700	205 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	ENOSF1	Q7L5Y1	443 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	EEPD1	Q7L9B9	569 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	CBWD2	Q8IUF1	395 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	FBXL13	Q8NEE6	735 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	SEPT1	Q8WYJ6	367 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	BSND	Q8WZ55	320 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	TMEM143	Q96AN5	459 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	SLC10A4	Q96EP9	437 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	PSMB7	Q99436	277 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	FAM213A	Q9BRX8	229 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	IMPG2	Q9BZV3	1241 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	EPC1	Q9H2F5	836 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	ANKZF1	Q9H8Y5	726 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	ANKFY1	Q9P2R3	1169 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	TRPC6	Q9Y210	931 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	PCDHGC5	Q9Y5F6	944 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	IVNS1ABP	Q9Y6Y0	642 aa		11.63	□□□□□ -0.55
SPIDR-222	ENST00000524006	RALGAPA2	Q2PPJ7	1873 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	SOWAHB	A6NEL2	793 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	ANKRD63	C9JTQ0	380 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	ZNF185	O15231	689 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	PMM2	O15305	246 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	PHACTR2	O75167	634 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	SEC31A	O94979	1220 aa	Known RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	TMEM253	P0C7T8	217 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	KRT5	P13647	590 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	ZSCAN20	P17040	1043 aa	Predicted RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	TNNI1	P19237	187 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	EDNRB	P24530	442 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	TCF7	P36402	384 aa	Predicted RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	EFNA5	P52803	228 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	DLG4	P78352	724 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	PPP3CA	Q08209	521 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	TTLL4	Q14679	1199 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	CLUL1	Q15846	466 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	PKN2	Q16513	984 aa	Known RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	LONRF2	Q1L5Z9	754 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	DAAM2	Q86T65	1068 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	GLYCTK	Q8IVS8	523 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	DHX37	Q8IY37	1157 aa	Known RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	NOA1	Q8NC60	698 aa	Known RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	SHCBP1	Q8NEM2	672 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	RFFL	Q8WZ73	363 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	PBK	Q96KB5	322 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	AGPAT1	Q99943	283 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	MSTO1	Q9BUK6	570 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	CFHR5	Q9BXR6	569 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	PACSIN1	Q9BY11	444 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	NIFK	Q9BYG3	293 aa	Known RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	TMEM117	Q9H0C3	514 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	C2orf40	Q9H1Z8	148 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	PORCN	Q9H237	461 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	XPNPEP1	Q9NQW7	623 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	ARHGAP28	Q9P2N2	729 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	AMFR	Q9UKV5	643 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	AGO2	Q9UKV8	859 aa	Known RBP	11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	RAB21	Q9UL25	225 aa		11.62	□□□□□ -0.55
SPIDR-222	ENST00000524006	MGAM	O43451	1857 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	ZNF236	Q9UL36	1845 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	KCNK3	O14649	394 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	ATG7	O95352	703 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	CETP	P11597	493 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	HARS	P12081	509 aa	Known RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	ABCB4	P21439	1286 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	CXCR5	P32302	372 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	SPRYD7	Q5W111	196 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	WDR93	Q6P2C0	686 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	ARHGEF19	Q8IW93	802 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	RHOT2	Q8IXI1	618 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	MMGT1	Q8N4V1	131 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	GOLGA6L1	Q8N7Z2	621 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	AFAP1L1	Q8TED9	768 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	PSPC1	Q8WXF1	523 aa	Known RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	BBX	Q8WY36	941 aa	Predicted RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	SPATA33	Q96N06	139 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	PNKP	Q96T60	521 aa		11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	NTPCR	Q9BSD7	190 aa	Known RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	MRPL4	Q9BYD3	311 aa	Known RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	DHX33	Q9H6R0	707 aa	Known RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	RBAK	Q9NYW8	714 aa	Predicted RBP	11.61	□□□□□ -0.55
SPIDR-222	ENST00000524006	GOLGA6L10	A0A0M3HER8	536 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms