RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 RRN3P2A6NIE6 340 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 HMGB1P1B2RPK0 211 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 PI4K2BG5E9Z4 385 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 RNF225M0QZC1 329 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 ZMYND10O75800 440 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 TUBBP07437 444 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 PLA2G5P39877 138 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 FIGNQ5HY92 759 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 ZNF569Q5MCW4 686 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 TEX35Q5T0J7 233 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 SPOUT1Q5T280 376 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 PPP1R18Q6NYC8 613 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 FOXR2Q6PJQ5 311 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 RBM23Q86U06 439 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 RPAINQ86UA6 219 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 SLC35F6Q8N357 371 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 MSANTD4Q8NCY6 345 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 ACRBPQ8NEB7 543 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 LRRC15Q8TF66 581 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 HNRNPLLQ8WVV9 542 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 P2RX5Q93086 422 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 NAPGQ99747 312 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 DUSP9Q99956 384 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 C11orf84Q9BUA3 381 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 PARD6BQ9BYG5 372 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 EXOC1Q9NV70 894 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 RAB21Q9UL25 225 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 LRFN2Q9ULH4 789 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 EPN1Q9Y6I3 576 aaPredicted RBP8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 BDP1A6H8Y1 2624 aa8.57□□□□□ -1.04
TM4SF1-201ENST00000305366 TCF20Q9UGU0 1960 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 REV3LO60673 3130 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 A0A0U1RQJ8 604 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 TTC26A0AVF1 554 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 LINC01565O15544 149 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CCNT1O60563 726 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 NDUFA10O95299 355 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 KLRC1P26715 233 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CDK17Q00537 523 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 AMPD2Q01433 879 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 KRT76Q01546 638 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 DLX2Q07687 328 aaPredicted RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 PAK2Q13177 524 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 LETM2Q2VYF4 491 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 SWSAP1Q6NVH7 229 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CNNM4Q6P4Q7 775 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 KCNV2Q8TDN2 545 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 MICAL1Q8TDZ2 1067 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 ATRIPQ8WXE1 791 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 PABPC5Q96DU9 382 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 MTMR9Q96QG7 549 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 MMTAG2Q9BU76 263 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 ANO3Q9BYT9 981 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 TTYH3Q9C0H2 523 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CDHR5Q9HBB8 845 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 AGO4Q9HCK5 861 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 ARFGAP3Q9NP61 516 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 RIC8AQ9NPQ8 531 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 C11orf16Q9NQ32 467 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 PADI3Q9ULW8 664 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 MAPK8IP1Q9UQF2 711 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 TRPV2Q9Y5S1 764 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 MRPL42Q9Y6G3 142 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 BAZ2BQ9UIF8 2168 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 ADGRA3Q8IWK6 1321 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 PVALEFA0A1B0GWK0 134 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 A0A1W2PQJ5 194 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 MBLAC1A4D2B0 266 aaPredicted RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CLGNO14967 610 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 DGKIO75912 1065 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 HYAL1Q12794 435 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CEP55Q53EZ4 464 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 MTHFD1LQ6UB35 978 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CCDC170Q8IYT3 715 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 REXO1Q8N1G1 1221 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CSGALNACT2Q8N6G5 542 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 NEK9Q8TD19 979 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 TBCKQ8TEA7 893 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 LINC01599Q8WXQ3 324 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 CALML4Q96GE6 196 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 ERGIC2Q96RQ1 377 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 TUBGCP2Q9BSJ2 902 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 PLAGL2Q9UPG8 496 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 REXO2Q9Y3B8 237 aaKnown RBP8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 PCDHGC5Q9Y5F6 944 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 PCDHA2Q9Y5H9 948 aa8.56□□□□□ -1.04
TM4SF1-201ENST00000305366 GBF1Q92538 1859 aa8.55□□□□□ -1.04
TM4SF1-201ENST00000305366 GPR37L1O60883 481 aa8.55□□□□□ -1.04
TM4SF1-201ENST00000305366 CCNE2O96020 404 aa8.55□□□□□ -1.04
TM4SF1-201ENST00000305366 RB1P06400 928 aa8.55□□□□□ -1.04
TM4SF1-201ENST00000305366 DNAJB1P25685 340 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms