RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PYGMP11217 842 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 BRAFP15056 766 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 ATP4AP20648 1035 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 FMO5P49326 533 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
LDB3-209ENST00000623056 CALCOCO2Q13137 446 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 FBF1Q8TES7 1133 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 TXLNGQ9NUQ3 528 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 LRRC42Q9Y546 428 aa15.15■□□□□ 0.02
LDB3-209ENST00000623056 UPP2O95045 317 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 COMTP21964 271 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 STX2P32856 288 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 PSMC2P35998 433 aaKnown RBP15.14■□□□□ 0.01
LDB3-209ENST00000623056 CTCFP49711 727 aaPredicted RBP15.14■□□□□ 0.01
LDB3-209ENST00000623056 SPIRE1Q08AE8 756 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 MTFR1Q15390 333 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 ARHGAP44Q17R89 818 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 THEMIS2Q5TEJ8 643 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 ANO7Q6IWH7 933 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 CLEC10AQ8IUN9 316 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 SLC17A8Q8NDX2 589 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 POP1Q99575 1024 aaKnown RBP15.14■□□□□ 0.01
LDB3-209ENST00000623056 RUSC1Q9BVN2 902 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
LDB3-209ENST00000623056 RNPEPL1Q9HAU8 725 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 KCNG1Q9UIX4 513 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 ZMYND8Q9ULU4 1186 aaPredicted RBP15.14■□□□□ 0.01
LDB3-209ENST00000623056 KLHL33A6NCF5 533 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 TP73O15350 636 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 SPATA31C1P0DKV0 1188 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 CALB2P22676 271 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 ACVR2BQ13705 512 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 KIF22Q14807 665 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 SIX1Q15475 284 aaPredicted RBP15.14■□□□□ 0.01
LDB3-209ENST00000623056 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 CBWD3Q5JTY5 395 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 CBWD5Q5RIA9 395 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 TTBK2Q6IQ55 1244 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 MIGA2Q7L4E1 593 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 SLC13A5Q86YT5 568 aaPredicted RBP15.14■□□□□ 0.01
LDB3-209ENST00000623056 SLC20A1Q8WUM9 679 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 MAGEB18Q96M61 343 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 AGPAT1Q99943 283 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
LDB3-209ENST00000623056 BTAF1O14981 1849 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 DPPA5A6NC42 116 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L15C9J2P7 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L13C9JLJ4 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L11C9JVI0 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L18D6R9N7 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L22D6RA61 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L17D6RBQ6 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L19D6RCP7 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L20D6RJB6 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
LDB3-209ENST00000623056 PEX11AO75192 247 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 FTLP02792 175 aaPredicted RBP15.13■□□□□ 0.01
LDB3-209ENST00000623056 FESP07332 822 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 CHKAP35790 457 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 ZNF543Q08ER8 600 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L24Q0WX57 530 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 PARP6Q2NL67 630 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 USP17L6PQ6QN14 398 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 RNF217Q8TC41 542 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 MYLK2Q9H1R3 596 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 LRMDAQ9H2I8 198 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 APEX2Q9UBZ4 518 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 SRP68Q9UHB9 627 aaKnown RBP15.13■□□□□ 0.01
LDB3-209ENST00000623056 CHORDC1Q9UHD1 332 aaPredicted RBP15.13■□□□□ 0.01
LDB3-209ENST00000623056 ZMYM2Q9UBW7 1377 aa15.13■□□□□ 0.01
LDB3-209ENST00000623056 ANKRD33BA6NCL7 494 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 AHCYL1O43865 530 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 LRRN2O75325 713 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 TBCAO75347 108 aaKnown RBP15.12■□□□□ 0.01
LDB3-209ENST00000623056 ECEL1O95672 775 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 SLC16A2P36021 539 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 MESDQ14696 234 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 POTEAQ6S8J7 498 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 SLFN12Q8IYM2 578 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 CYP4X1Q8N118 509 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 PIGOQ8TEQ8 1089 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 RPS6KC1Q96S38 1066 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 CCNL1Q9UK58 526 aaPredicted RBP15.12■□□□□ 0.01
LDB3-209ENST00000623056 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 FOXN3O00409 490 aaPredicted RBP15.12■□□□□ 0.01
LDB3-209ENST00000623056 GNPATO15228 680 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 SNUPNO95149 360 aaKnown RBP15.12■□□□□ 0.01
LDB3-209ENST00000623056 TAC1P20366 129 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 RPA1P27694 616 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 FOXN2P32314 431 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 RAD23BP54727 409 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 ARHGEF18Q6ZSZ5 1173 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 SEPT14Q6ZU15 432 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 INTS8Q75QN2 995 aaKnown RBP15.12■□□□□ 0.01
LDB3-209ENST00000623056 SLC51AQ86UW1 340 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 ERMNQ8TAM6 284 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 CD101Q93033 1021 aa15.12■□□□□ 0.01
LDB3-209ENST00000623056 GRAMD1AQ96CP6 724 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms