RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DHX8Q14562 1220 aaKnown RBP15.38■□□□□ 0.05
CLIP3-205ENST00000592017 PPP2R5AQ15172 486 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 STK38Q15208 465 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 AMHR2Q16671 573 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 DUSP6Q16828 381 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 NOMO2Q5JPE7 1267 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 PLPP4Q5VZY2 271 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 CDCA2Q69YH5 1023 aaPredicted RBP15.38■□□□□ 0.05
CLIP3-205ENST00000592017 RINT1Q6NUQ1 792 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 NOTUMQ6P988 496 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 GLB1LQ6UWU2 654 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 TMEM173Q86WV6 379 aaPredicted RBP15.38■□□□□ 0.05
CLIP3-205ENST00000592017 ZNF396Q96N95 335 aaPredicted RBP15.38■□□□□ 0.05
CLIP3-205ENST00000592017 MRPL9Q9BYD2 267 aaKnown RBP15.38■□□□□ 0.05
CLIP3-205ENST00000592017 NFKBIZQ9BYH8 718 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 C2orf40Q9H1Z8 148 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 TBC1D13Q9NVG8 400 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 PUF60Q9UHX1 559 aaKnown RBP15.38■□□□□ 0.05
CLIP3-205ENST00000592017 CD207Q9UJ71 328 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 INPP5FQ9Y2H2 1132 aa15.38■□□□□ 0.05
CLIP3-205ENST00000592017 CCDC169A6NNP5 214 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 ARF4P18085 180 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 AXLP30530 894 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 TXLNAP40222 546 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 NDUFV1P49821 464 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 KRT17Q04695 432 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 ZP2Q05996 745 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 SMAD4Q13485 552 aaKnown RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 PCBP1Q15365 356 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 SMAD2Q15796 467 aaKnown RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 PDE12Q6L8Q7 609 aaKnown RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 C1orf186Q6ZWK4 172 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 CDR2LQ86X02 465 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 SYT2Q8N9I0 419 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 SMG8Q8ND04 991 aaKnown RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 PGBD4Q96DM1 585 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 EPSTI1Q96J88 318 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 DRC1Q96MC2 740 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 TCF25Q9BQ70 676 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 EIF2AQ9BY44 585 aaKnown RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 TRIM6Q9C030 488 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 NRDE2Q9H7Z3 1164 aa15.37■□□□□ 0.05
CLIP3-205ENST00000592017 PRMT7Q9NVM4 692 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 TFIP11Q9UBB9 837 aaKnown RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 BARX2Q9UMQ3 279 aaPredicted RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 SRPRBQ9Y5M8 271 aaKnown RBP15.37■□□□□ 0.05
CLIP3-205ENST00000592017 FNDC1Q4ZHG4 1894 aaPredicted RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 SLC26A4O43511 780 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 PRKCBP05771 671 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 GALTP07902 379 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 SSTR3P32745 418 aaPredicted RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 NASPP49321 788 aaPredicted RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 ALDH7A1P49419 539 aaKnown RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 SLC12A3P55017 1021 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 PEX3P56589 373 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 CACNB1Q02641 598 aaPredicted RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 DMP1Q13316 513 aaPredicted RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 SLC39A14Q15043 492 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 MAPK6Q16659 721 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 USP49Q70CQ1 688 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 ZNF280BQ86YH2 543 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 DAW1Q8N136 415 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 KRI1Q8N9T8 703 aaKnown RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 BCL7CQ8WUZ0 217 aaPredicted RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 CCDC51Q96ER9 411 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 APOL6Q9BWW8 343 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 NGRNQ9NPE2 291 aaKnown RBP15.36■□□□□ 0.05
CLIP3-205ENST00000592017 ENTPD7Q9NQZ7 604 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 FAM50BQ9Y247 325 aa15.36■□□□□ 0.05
CLIP3-205ENST00000592017 NPHP3-ACAD11A0A0J9YXS1 232 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 ZC3H11AO75152 810 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLIP3-205ENST00000592017 NPTXRO95502 500 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 NCLP19338 710 aaKnown RBP15.35■□□□□ 0.05
CLIP3-205ENST00000592017 GUCY2CP25092 1073 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 SLC11A1P49279 550 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 COASYQ13057 564 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 MAPK7Q13164 816 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 PRPF4BQ13523 1007 aaKnown RBP15.35■□□□□ 0.05
CLIP3-205ENST00000592017 KCNC3Q14003 757 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 BECN1Q14457 450 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 MCM6Q14566 821 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 TMC7Q7Z402 723 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 GPBP1Q86WP2 473 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 ADHFE1Q8IWW8 467 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 MRPL43Q8N983 215 aaKnown RBP15.35■□□□□ 0.05
CLIP3-205ENST00000592017 LRRC15Q8TF66 581 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 RSPH1Q8WYR4 309 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 RAD54LQ92698 747 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 CDCA3Q99618 268 aaPredicted RBP15.35■□□□□ 0.05
CLIP3-205ENST00000592017 TIPINQ9BVW5 301 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 CCSER1Q9C0I3 900 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 DNAJB4Q9UDY4 337 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 PRKAG3Q9UGI9 489 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms