RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TBCKQ8TEA7 893 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 NAT14Q8WUY8 206 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 OLFM3Q96PB7 478 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 HYOU1Q9Y4L1 999 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CTDP1Q9Y5B0 961 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 A6NJR5 290 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 MGEA5O60502 916 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 UBTFL6P0CB48 400 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 ZCCHC18P0CG32 403 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 VHLP40337 213 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 PPP1R2P41236 205 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 RNASE9P60153 205 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 RASSF7Q02833 373 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TBL3Q12788 808 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 LRP8Q14114 963 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 LRRC41Q15345 812 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TXNRD3Q86VQ6 643 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 DNAJC1Q96KC8 554 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CGREF1Q99674 301 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 MRPL46Q9H2W6 279 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TPK1Q9H3S4 243 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 MAGEF1Q9HAY2 307 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 EPHB6O15197 1021 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 STK10O94804 968 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 FGFR1OPO95684 399 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TCP1P17987 556 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TUFMP49411 452 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 RNASELQ05823 741 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CCDC84Q86UT8 332 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 BPHLQ86WA6 291 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 RIBC1Q8N443 379 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 CCDC28BQ9BUN5 200 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
SMARCA4-217ENST00000591595 SIGLEC16A6NMB1 481 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 GM2AP17900 193 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 HSD17B3P37058 310 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 CDK17Q00537 523 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 CYLC2Q14093 348 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 SCAIQ8N9R8 606 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 SEMA6BQ9H3T3 888 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 SSX2IPQ9Y2D8 614 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 H0YGN5 161 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 SERPINB7O75635 380 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 OXSR1O95747 527 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 TMEM266Q2M3C6 531 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 REXO1Q8N1G1 1221 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 CACTIN-AS1Q8N1I8 211 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 UTP4Q969X6 686 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 BHMT2Q9H2M3 363 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 RBM12Q9NTZ6 932 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 STOML1Q9UBI4 398 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 NFS1Q9Y697 457 aa13.08□□□□□ -0.32
SMARCA4-217ENST00000591595 PDE5AO76074 875 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 LCA5LO95447 670 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 PLCG2P16885 1265 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 KIF22Q14807 665 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 MAN2A1Q16706 1144 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 PDCD4Q53EL6 469 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 UIMC1Q96RL1 719 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 TSG101Q99816 390 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 C7orf25Q9BPX7 421 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 ETNK1Q9HBU6 452 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 FAIMQ9NVQ4 179 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 LRRC8BQ6P9F7 803 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 C3orf62Q6ZUJ4 267 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 NOX5Q96PH1 765 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 TUT1Q9H6E5 874 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms