RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
CACNB3-219ENST00000551544 MAP2K1Q02750 393 aaPredicted RBP14.05□□□□□ -0.16
CACNB3-219ENST00000551544 NOP9Q86U38 636 aaKnown RBP14.05□□□□□ -0.16
CACNB3-219ENST00000551544 FBXO25Q8TCJ0 367 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 C7orf43Q8WVR3 580 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 ELMO3Q96BJ8 720 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 CCDC127Q96BQ5 260 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 BTBD6Q96KE9 485 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 TMEM117Q9H0C3 514 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 ZDHHC18Q9NUE0 388 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 SCAF8Q9UPN6 1271 aaKnown RBP14.05□□□□□ -0.16
CACNB3-219ENST00000551544 TLDC2A0PJX2 215 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 FAM187AA6NFU0 413 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 H0YHG0 523 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 CAP2P40123 477 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 QARSP47897 775 aaKnown RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 FNTAP49354 379 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 CNTNAP1P78357 1384 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 LLGL1Q15334 1064 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 C11orf63Q6NUN7 778 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 RBBP6Q7Z6E9 1792 aaKnown RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 CPNE8Q86YQ8 564 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 OGFOD1Q8N543 542 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 SYNGAP1Q96PV0 1343 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 PSMD1Q99460 953 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 RASAL2Q9UJF2 1139 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 COL2A1P02458 1487 aaPredicted RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 MIF4GDA9UHW6 222 aaKnown RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 KIAA0391O15091 583 aaKnown RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 PHF2O75151 1096 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 CAND2O75155 1236 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 RTN2O75298 545 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 ADRB2P07550 413 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 ALAS1P13196 640 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 YWHABP31946 246 aaKnown RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 HSD17B4P51659 736 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 PMS2P54278 862 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 DHX34Q14147 1143 aaKnown RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 TKFCQ3LXA3 575 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 RSBN1LQ6PCB5 846 aaPredicted RBP14.04□□□□□ -0.16
CACNB3-219ENST00000551544 SLC47A2Q86VL8 602 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 PRELID2Q8N945 189 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 MDM1Q8TC05 714 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 EPS8L1Q8TE68 723 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 SAAL1Q96ER3 474 aa14.04□□□□□ -0.16
CACNB3-219ENST00000551544 TRAPPC3O43617 180 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 ICAM1P05362 532 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 CHRNB2P17787 502 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 EIF2AK2P19525 551 aaKnown RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 MNAT1P51948 309 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 SPP2Q13103 211 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 FAM102BQ5T8I3 360 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 SEL1L2Q5TEA6 688 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 CBWD2Q8IUF1 395 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 ZDHHC14Q8IZN3 488 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 UHMK1Q8TAS1 419 aaKnown RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 RAPGEF5Q92565 580 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 ZNF341Q9BYN7 854 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 TXLNGYQ9BZA5 131 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 AGO4Q9HCK5 861 aaKnown RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 A1CFQ9NQ94 594 aaKnown RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 PFASO15067 1338 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 ZNF536O15090 1300 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 TCRBV7S2A1N4TA0A589 114 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 SRRM3A6NNA2 597 aaPredicted RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 CCDC169A6NNP5 214 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 P4HA2O15460 535 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 SPOPO43791 374 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 MMEP08473 750 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 HADHBP55084 474 aaKnown RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 MTMR1Q13613 665 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 ALCAMQ13740 583 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 UGCGQ16739 394 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 QPCTQ16769 361 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 TTC27Q6P3X3 843 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 ZDHHC24Q6UX98 284 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 KREMEN1Q96MU8 473 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 POP1Q99575 1024 aaKnown RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 KCNG1Q9UIX4 513 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 GGA2Q9UJY4 613 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 DBR1Q9UK59 544 aaKnown RBP14.03□□□□□ -0.16
CACNB3-219ENST00000551544 PNMA2Q9UL42 364 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 PTPN22Q9Y2R2 807 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 BRWD3Q6RI45 1802 aa14.03□□□□□ -0.16
CACNB3-219ENST00000551544 PLA2G6O60733 806 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 PYGMP11217 842 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 MYCLP12524 364 aaPredicted RBP14.02□□□□□ -0.16
CACNB3-219ENST00000551544 PTGER2P43116 358 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 PTGIRP43119 386 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 EIF3BP55884 814 aaKnown RBP14.02□□□□□ -0.16
CACNB3-219ENST00000551544 MRPS9P82933 396 aaKnown RBP14.02□□□□□ -0.16
CACNB3-219ENST00000551544 RASA3Q14644 834 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 CLUL1Q15846 466 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 DENND2CQ68D51 928 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 PLA2G4FQ68DD2 849 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 CCDC137Q6PK04 289 aaKnown RBP14.02□□□□□ -0.16
CACNB3-219ENST00000551544 NSMFQ6X4W1 530 aa14.02□□□□□ -0.16
CACNB3-219ENST00000551544 RPAINQ86UA6 219 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms