RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
COPB1-206ENST00000529210 C2orf71A6NGG8 1288 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 LRRIQ4A6NIV6 560 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 HIDE1A8MVS5 230 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 PI4K2BG5E9Z4 385 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 SLC26A4O43511 780 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 B4GALT3O60512 393 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 DDHD2O94830 711 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 EFEMP2O95967 443 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 SRGAP2BP0DMP2 458 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 CTSAP10619 480 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 ITGA4P13612 1032 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 SLC11A1P49279 550 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 AFF1P51825 1210 aaKnown RBP13.34□□□□□ -0.27
COPB1-206ENST00000529210 RNASELQ05823 741 aaKnown RBP13.34□□□□□ -0.27
COPB1-206ENST00000529210 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
COPB1-206ENST00000529210 KRT79Q5XKE5 535 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 EP400NLQ6ZTU2 488 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 TMC7Q7Z402 723 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 RBM23Q86U06 439 aaKnown RBP13.34□□□□□ -0.27
COPB1-206ENST00000529210 ZNF280BQ86YH2 543 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 ZBTB8OSQ8IWT0 167 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 COLGALT2Q8IYK4 626 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 HACE1Q8IYU2 909 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 BSNDQ8WZ55 320 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 SUSD6Q92537 303 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 CPB2Q96IY4 423 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 POP1Q99575 1024 aaKnown RBP13.34□□□□□ -0.27
COPB1-206ENST00000529210 BACH2Q9BYV9 841 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 CCDC113Q9H0I3 377 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 BHMT2Q9H2M3 363 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
COPB1-206ENST00000529210 DNAJB4Q9UDY4 337 aa13.34□□□□□ -0.27
COPB1-206ENST00000529210 TDRD15B5MCY1 1934 aaKnown RBP13.34□□□□□ -0.27
COPB1-206ENST00000529210 ARL5CA6NH57 179 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 NT5C1B-RDH14C9J2C7 533 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 H3BQV1 296 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 ACKR2O00590 384 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 PER2O15055 1255 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 B4GALT5O43286 388 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 CSPG5O95196 566 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 ALDH2P05091 517 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 HOXB8P17481 243 aaPredicted RBP13.33□□□□□ -0.28
COPB1-206ENST00000529210 LONRF3Q496Y0 759 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 LARP1BQ659C4 914 aaKnown RBP13.33□□□□□ -0.28
COPB1-206ENST00000529210 MCTP1Q6DN14 999 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.28
COPB1-206ENST00000529210 VPS52Q8N1B4 723 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 GSTCDQ8NEC7 633 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 TIPINQ9BVW5 301 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 C17orf75Q9HAS0 396 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 BARX2Q9UMQ3 279 aaPredicted RBP13.33□□□□□ -0.28
COPB1-206ENST00000529210 DNM3Q9UQ16 869 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 INPP5FQ9Y2H2 1132 aa13.33□□□□□ -0.28
COPB1-206ENST00000529210 N4BP3O15049 544 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 LILRB3O75022 631 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 BMP15O95972 392 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 EFNA5P52803 228 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 CBX2Q14781 532 aaPredicted RBP13.32□□□□□ -0.28
COPB1-206ENST00000529210 MAPK6Q16659 721 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 ANKRD54Q6NXT1 300 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 C1orf186Q6ZWK4 172 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 GPR65Q8IYL9 337 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 BCL7CQ8WUZ0 217 aaPredicted RBP13.32□□□□□ -0.28
COPB1-206ENST00000529210 CASP10Q92851 521 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.288e-11■■□□□ 12.2
COPB1-206ENST00000529210 KCNN1Q92952 543 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 IFT74Q96LB3 600 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 AK8Q96MA6 479 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 GAD1Q99259 594 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 VN1R3Q9BXE9 311 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
COPB1-206ENST00000529210 NT5C3AQ9H0P0 336 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 NXF3Q9H4D5 531 aaKnown RBP13.32□□□□□ -0.28
COPB1-206ENST00000529210 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
COPB1-206ENST00000529210 PP2D1A8MPX8 630 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 NRP1O14786 923 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 GPR37L1O60883 481 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 CLASP2O75122 1294 aaKnown RBP13.31□□□□□ -0.28
COPB1-206ENST00000529210 C1RP00736 705 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 PRKCBP05771 671 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 PDCP20941 246 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 GUCY2CP25092 1073 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 MLH1P40692 756 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 GRIK3Q13003 919 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 CLUL1Q15846 466 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 SYCE2Q6PIF2 218 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 DAW1Q8N136 415 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 DEPTORQ8TB45 409 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 INTS4Q96HW7 963 aaKnown RBP13.31□□□□□ -0.28
COPB1-206ENST00000529210 FAM193BQ96PV7 902 aaPredicted RBP13.31□□□□□ -0.28
COPB1-206ENST00000529210 NTPCRQ9BSD7 190 aaKnown RBP13.31□□□□□ -0.28
COPB1-206ENST00000529210 PDZD7Q9H5P4 517 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 EPHX3Q9H6B9 360 aa13.31□□□□□ -0.28
COPB1-206ENST00000529210 TMEM134Q9H6X4 195 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms