RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 AKAP3O75969 853 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 FGFR4P22455 802 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.31
SHMT2-202ENST00000414700 CYP2J2P51589 502 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 EFNA5P52803 228 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 KRT31Q15323 416 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 PKN2Q16513 984 aaKnown RBP16.96■□□□□ 0.31
SHMT2-202ENST00000414700 SERINC5Q86VE9 423 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 ZBTB8OSQ8IWT0 167 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 U2AF1L4Q8WU68 220 aaKnown RBP16.96■□□□□ 0.31
SHMT2-202ENST00000414700 TMEM40Q8WWA1 233 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 ZBTB45Q96K62 511 aaPredicted RBP16.96■□□□□ 0.31
SHMT2-202ENST00000414700 SCLT1Q96NL6 688 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 OSMRQ99650 979 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 TRIM5Q9C035 493 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 HAPLN2Q9GZV7 340 aa16.96■□□□□ 0.31
SHMT2-202ENST00000414700 VGLL3A8MV65 326 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 SERPINC1P01008 464 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 PRKCBP05771 671 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 PTGISQ16647 500 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 MAPK6Q16659 721 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 SARM1Q6SZW1 724 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 CDR2LQ86X02 465 aaPredicted RBP16.96■□□□□ 0.3
SHMT2-202ENST00000414700 NFKBIZQ9BYH8 718 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 XPO4Q9C0E2 1151 aaKnown RBP16.96■□□□□ 0.3
SHMT2-202ENST00000414700 INTS13Q9NVM9 706 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 EXOC7Q9UPT5 735 aa16.96■□□□□ 0.3
SHMT2-202ENST00000414700 CDC25BP30305 580 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 PHKA2P46019 1235 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 POU5F1BQ06416 359 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 ARMCX5Q6P1M9 558 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 RDH13Q8NBN7 331 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 TRPV6Q9H1D0 765 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 C2orf40Q9H1Z8 148 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 FZD8Q9H461 694 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 DMAC2Q9NW81 257 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 TAB2Q9NYJ8 693 aa16.95■□□□□ 0.3
SHMT2-202ENST00000414700 TULP2O00295 520 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 CETN3O15182 167 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 B4GALT4O60513 344 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 SGPL1O95470 568 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 LIG4P49917 911 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 AMHR2Q16671 573 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 TAF2Q6P1X5 1199 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 ZNF410Q86VK4 478 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 IFNLR1Q8IU57 520 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-202ENST00000414700 NOC3LQ8WTT2 800 aaKnown RBP16.94■□□□□ 0.3
SHMT2-202ENST00000414700 SAAL1Q96ER3 474 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 CRISPLD2Q9H0B8 497 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 HSPBP1Q9NZL4 362 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 ANKFY1Q9P2R3 1169 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 GOLGA8IPA6NC78 632 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 GOLGA8JA6NMD2 632 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 PIGRP01833 764 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 CTSHP09668 335 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 UBASH3AP57075 661 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 NFIL3Q16649 462 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 FILIP1Q7Z7B0 1213 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 SLC43A3Q8NBI5 491 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
SHMT2-202ENST00000414700 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 VPS16Q9H269 839 aa16.94■□□□□ 0.3
SHMT2-202ENST00000414700 LIMA1Q9UHB6 759 aaKnown RBP16.94■□□□□ 0.3
SHMT2-202ENST00000414700 ACKR2O00590 384 aa16.93■□□□□ 0.3
SHMT2-202ENST00000414700 TFRCP02786 760 aaKnown RBP16.93■□□□□ 0.3
SHMT2-202ENST00000414700 RPL13P26373 211 aaKnown RBP16.93■□□□□ 0.3
SHMT2-202ENST00000414700 EEF1GP26641 437 aaKnown RBP16.93■□□□□ 0.3
SHMT2-202ENST00000414700 GOLGA5Q8TBA6 731 aa16.93■□□□□ 0.3
SHMT2-202ENST00000414700 DIS3LQ8TF46 1054 aaKnown RBP16.93■□□□□ 0.3
SHMT2-202ENST00000414700 POMGNT1Q8WZA1 660 aa16.93■□□□□ 0.3
SHMT2-202ENST00000414700 ACO2Q99798 780 aaKnown RBP16.93■□□□□ 0.3
SHMT2-202ENST00000414700 TUBGCP2Q9BSJ2 902 aa16.93■□□□□ 0.3
SHMT2-202ENST00000414700 OSBPL7Q9BZF2 842 aa16.93■□□□□ 0.3
SHMT2-202ENST00000414700 SENP6Q9GZR1 1112 aaPredicted RBP16.93■□□□□ 0.3
SHMT2-202ENST00000414700 TSPYL1Q9H0U9 437 aa16.93■□□□□ 0.3
SHMT2-202ENST00000414700 LRRC10BA6NIK2 292 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 TEX33O43247 280 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 EXOC3O60645 756 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 SCP2P22307 547 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 ABCD1P33897 745 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 PRPF4BQ13523 1007 aaKnown RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 CCDC40Q4G0X9 1142 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 SLC9A9Q8IVB4 645 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 C12orf56Q8IXR9 622 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 CACTINQ8WUQ7 758 aaKnown RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 CPB2Q96IY4 423 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 MRPL4Q9BYD3 311 aaKnown RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 MAGEC2Q9UBF1 373 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 ARVCFO00192 962 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 FGFR1OPO95684 399 aaKnown RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 MTIF2P46199 727 aaKnown RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 COPB1P53618 953 aaKnown RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 ATN1P54259 1190 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 SPAG1Q07617 926 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 SNX17Q15036 470 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 SEZ6Q53EL9 994 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 MIIPQ5JXC2 388 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 EEF1DP3Q658K8 133 aa16.92■□□□□ 0.3
SHMT2-202ENST00000414700 PRMT7Q9NVM4 692 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-202ENST00000414700 NOD1Q9Y239 953 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms