RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 EML1O00423 815 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 EVI5O60447 810 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 PPP1R37O75864 691 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 MYZAPP0CAP1 466 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 LSP1P33241 339 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 PRKCZQ05513 592 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 ITGB3BPQ13352 177 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-201ENST00000277198 ZNF720Q7Z2F6 126 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 DAAM2Q86T65 1068 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 C12orf42Q96LP6 360 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 UIMC1Q96RL1 719 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 PNMA3Q9UL41 463 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 PLAAQ9Y263 795 aa13.98□□□□□ -0.17
C9orf3-201ENST00000277198 TNRC18O15417 2968 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-201ENST00000277198 HSD17B3P37058 310 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 MDH1P40925 334 aaKnown RBP13.97□□□□□ -0.17
C9orf3-201ENST00000277198 GALCP54803 685 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 HADHBP55084 474 aaKnown RBP13.97□□□□□ -0.17
C9orf3-201ENST00000277198 RNASE9P60153 205 aaKnown RBP13.97□□□□□ -0.17
C9orf3-201ENST00000277198 KIF22Q14807 665 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 TCEAL1Q15170 157 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 LRCH2Q5VUJ6 765 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
C9orf3-201ENST00000277198 RNPC3Q96LT9 517 aaKnown RBP13.97□□□□□ -0.17
C9orf3-201ENST00000277198 CARD9Q9H257 536 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 PLEKHA4Q9H4M7 779 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-201ENST00000277198 RGL1Q9NZL6 768 aa13.97□□□□□ -0.17
C9orf3-201ENST00000277198 H0YGN5 161 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-201ENST00000277198 CLIC2O15247 247 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 GUCY2CP25092 1073 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 STAT2P52630 851 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-201ENST00000277198 PDCLQ13371 301 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 Q3C1V9 767 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 CEP85LQ5SZL2 805 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 KCTD16Q68DU8 428 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 NEK9Q8TD19 979 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 CTNNBL1Q8WYA6 563 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-201ENST00000277198 FIZ1Q96SL8 496 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 RBPJLQ9UBG7 517 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 APEX2Q9UBZ4 518 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 SRRDQ9UH36 339 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 DNAJC12Q9UKB3 198 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 UTP11Q9Y3A2 253 aaKnown RBP13.96□□□□□ -0.17
C9orf3-201ENST00000277198 NFS1Q9Y697 457 aa13.96□□□□□ -0.17
C9orf3-201ENST00000277198 P4HA2O15460 535 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 PLA2G6O60733 806 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 POLR2MP0CAP2 368 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 MAPTP10636 758 aaKnown RBP13.96□□□□□ -0.18
C9orf3-201ENST00000277198 HOXA13P31271 388 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-201ENST00000277198 KCNA1Q09470 495 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 ALCAMQ13740 583 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 DRAP1Q14919 205 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-201ENST00000277198 FAM110CQ1W6H9 321 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 AGBL2Q5U5Z8 902 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 TPH2Q8IWU9 490 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 FAM178BQ8IXR5 827 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 SH2D3CQ8N5H7 860 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 OLIG1Q8TAK6 271 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 CYP2W1Q8TAV3 490 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 LNX1Q8TBB1 728 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-201ENST00000277198 RAB17Q9H0T7 212 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 AGPAT3Q9NRZ7 376 aa13.96□□□□□ -0.18
C9orf3-201ENST00000277198 AJAP1Q9UKB5 411 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-201ENST00000277198 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 KIAA0100Q14667 2235 aaKnown RBP13.95□□□□□ -0.18
C9orf3-201ENST00000277198 MYPNQ86TC9 1320 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 ANKRD62A6NC57 917 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 CNMDO75829 334 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 CTNNA1P35221 906 aaKnown RBP13.95□□□□□ -0.18
C9orf3-201ENST00000277198 EIF3BP55884 814 aaKnown RBP13.95□□□□□ -0.18
C9orf3-201ENST00000277198 FCGRTP55899 365 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
C9orf3-201ENST00000277198 CTTNQ14247 550 aaKnown RBP13.95□□□□□ -0.18
C9orf3-201ENST00000277198 TRADDQ15628 312 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 PTGISQ16647 500 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 CATSPERGQ6ZRH7 1159 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 RHOT2Q8IXI1 618 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 SLC35G2Q8TBE7 412 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 DYDC2Q96IM9 177 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 STRA6Q9BX79 667 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 DDX47Q9H0S4 455 aaKnown RBP13.95□□□□□ -0.18
C9orf3-201ENST00000277198 PORCNQ9H237 461 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 ARHGEF10LQ9HCE6 1279 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 TMX2Q9Y320 296 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 PFASO15067 1338 aa13.95□□□□□ -0.18
C9orf3-201ENST00000277198 GOLGA6L10A0A0M3HER8 536 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 TNPO2O14787 897 aaKnown RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GAS7O60861 476 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 ERLIN2O94905 339 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 FAM107AO95990 144 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 ATP1A2P50993 1020 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 DRG2P55039 364 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms