RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 EEF1DP3Q658K8 133 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 SLC27A1Q6PCB7 646 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 CCDC73Q6ZRK6 1079 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 DYMQ7RTS9 669 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 PGBD4Q96DM1 585 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 CCDC51Q96ER9 411 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
LSM5-201ENST00000223084 NXF3Q9H4D5 531 aaKnown RBP13.97□□□□□ -0.17
LSM5-201ENST00000223084 ZHX3Q9H4I2 956 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 PDZD7Q9H5P4 517 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 C17orf75Q9HAS0 396 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 ALG13Q9NP73 1137 aaKnown RBP13.97□□□□□ -0.17
LSM5-201ENST00000223084 RWDD3Q9Y3V2 267 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 MYMKA6NI61 221 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 GRM6O15303 877 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 FAM13AO94988 1023 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 ITGB1P05556 798 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 RB1P06400 928 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 POU3F3P20264 500 aaPredicted RBP13.96□□□□□ -0.17
LSM5-201ENST00000223084 AKAP5P24588 427 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 SV2BQ7L1I2 683 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 LRRC43Q8N309 656 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 MYCT1Q8N699 235 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 KLHL23Q8NBE8 558 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 TMEM161BQ8NDZ6 487 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 LEO1Q8WVC0 666 aaPredicted RBP13.96□□□□□ -0.17
LSM5-201ENST00000223084 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 STAMQ92783 540 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 DHX58Q96C10 678 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 SPATA32Q96LK8 384 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 NTPCRQ9BSD7 190 aaKnown RBP13.96□□□□□ -0.17
LSM5-201ENST00000223084 C11orf84Q9BUA3 381 aaPredicted RBP13.96□□□□□ -0.17
LSM5-201ENST00000223084 TMEM134Q9H6X4 195 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 RSAD1Q9HA92 442 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 ODF2LQ9ULJ1 636 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 PLAGL2Q9UPG8 496 aa13.96□□□□□ -0.17
LSM5-201ENST00000223084 PHLPP2Q6ZVD8 1323 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 N4BP3O15049 544 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
LSM5-201ENST00000223084 MAPTP10636 758 aaKnown RBP13.95□□□□□ -0.18
LSM5-201ENST00000223084 DNAJB1P25685 340 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 SMTNP53814 917 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 KRT85P78386 507 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 NOMO2Q5JPE7 1267 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 ATF7IP2Q5U623 682 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 CNNM3Q8NE01 707 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 DDX12PQ92771 950 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 GAD1Q99259 594 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 TARS2Q9BW92 718 aaKnown RBP13.95□□□□□ -0.18
LSM5-201ENST00000223084 PLVAPQ9BX97 442 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 GBP3Q9H0R5 595 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 PARVGQ9HBI0 331 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 MIOSQ9NXC5 875 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
LSM5-201ENST00000223084 PARP2Q9UGN5 583 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
LSM5-201ENST00000223084 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
LSM5-201ENST00000223084 NT5C1B-RDH14C9J2C7 533 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 B4GALT3O60512 393 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 POMCP01189 267 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 LAG3P18627 525 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
LSM5-201ENST00000223084 MLH1P40692 756 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 ZNF131P52739 623 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 NCKAP1LP55160 1127 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
LSM5-201ENST00000223084 E2F4Q16254 413 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 RESP18Q5W5W9 173 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 HAUS6Q7Z4H7 955 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 THNSL1Q8IYQ7 743 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 SPPL3Q8TCT6 385 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 PRUNE2Q8WUY3 3088 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 P2RX5Q93086 422 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
LSM5-201ENST00000223084 ZFP42Q96MM3 310 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 ACO2Q99798 780 aaKnown RBP13.94□□□□□ -0.18
LSM5-201ENST00000223084 COL25A1Q9BXS0 654 aaPredicted RBP13.94□□□□□ -0.18
LSM5-201ENST00000223084 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
LSM5-201ENST00000223084 MRPL4Q9BYD3 311 aaKnown RBP13.94□□□□□ -0.18
LSM5-201ENST00000223084 NRDE2Q9H7Z3 1164 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 PLXNA4Q9HCM2 1894 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 AAASQ9NRG9 546 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 LMCD1Q9NZU5 365 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 KLK14Q9P0G3 267 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 EYSQ5T1H1 3165 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
LSM5-201ENST00000223084 ARL5CA6NH57 179 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 K7ENM7 598 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 POLR2DO15514 142 aaKnown RBP13.93□□□□□ -0.18
LSM5-201ENST00000223084 TRAK2O60296 914 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 ZC3H11AO75152 810 aaKnown RBP eCLIP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms