RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MAP2K1Q02750 393 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 ZNF844Q08AG5 666 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TNIP1Q15025 636 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 CBWD2Q8IUF1 395 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TTLL6Q8N841 843 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 XXYLT1Q8NBI6 393 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 ATP8B4Q8TF62 1192 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 KRT35Q92764 455 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TMEM117Q9H0C3 514 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TMEM206Q9H813 350 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TMEM51Q9NW97 253 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 CTTNBP2NLQ9P2B4 639 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 ASTN2O75129 1339 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 WNT10BO00744 389 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 CCDC172P0C7W6 258 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 BCRP11274 1271 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 CHRNB2P17787 502 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 FAM102BQ5T8I3 360 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 CCDC26Q8TAB7 109 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 GLG1Q92896 1179 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 BTBD6Q96KE9 485 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 POP1Q99575 1024 aaKnown RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 DEFB129Q9H1M3 183 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 TOPORSQ9NS56 1045 aaPredicted RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 BCCIPQ9P287 314 aaKnown RBP eCLIP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 DBR1Q9UK59 544 aaKnown RBP10.86□□□□□ -0.67
LRRC28-216ENST00000559819 ALG6Q9Y672 507 aa10.86□□□□□ -0.67
LRRC28-216ENST00000559819 MYO1FO00160 1098 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 CCNE2O96020 404 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 CALCAP01258 141 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 ASNSP08243 561 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 RPS6P62753 249 aaKnown RBP10.85□□□□□ -0.67
LRRC28-216ENST00000559819 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
LRRC28-216ENST00000559819 NOP9Q86U38 636 aaKnown RBP10.85□□□□□ -0.67
LRRC28-216ENST00000559819 TEX2Q8IWB9 1127 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 PRPF38AQ8NAV1 312 aaKnown RBP10.85□□□□□ -0.67
LRRC28-216ENST00000559819 SEMA4DQ92854 862 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 CCDC127Q96BQ5 260 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 KREMEN1Q96MU8 473 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 TELO2Q9Y4R8 837 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 PHF20L1A8MW92 1017 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 EGFRP00533 1210 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 DPEP1P16444 411 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 LSP1P33241 339 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 MXI1P50539 228 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 SEC24CP53992 1094 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 PGM5Q15124 567 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 PCNX4Q63HM2 1172 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 TMC3Q7Z5M5 1100 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 SLC47A2Q86VL8 602 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 LRRC45Q96CN5 670 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 WNK4Q96J92 1243 aa10.85□□□□□ -0.67
LRRC28-216ENST00000559819 UTP11Q9Y3A2 253 aaKnown RBP10.85□□□□□ -0.67
LRRC28-216ENST00000559819 CCDC169A6NNP5 214 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 EBAG9O00559 213 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 NDUFAB1O14561 156 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 CYP26A1O43174 497 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 SORBS3O60504 671 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 CLSTN1O94985 981 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 MYZAPP0CAP1 466 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 VCAM1P19320 739 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 ADSSP30520 456 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 GTF2BQ00403 316 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 DHX9Q08211 1270 aaKnown RBP10.84□□□□□ -0.67
LRRC28-216ENST00000559819 MYBPC2Q14324 1141 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 RASA3Q14644 834 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 MESDQ14696 234 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 LRIG3Q6UXM1 1119 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 FAM83AQ86UY5 434 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 PPM1KQ8N3J5 372 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 TTC7AQ9ULT0 858 aaPredicted RBP10.84□□□□□ -0.67
LRRC28-216ENST00000559819 FAM169AQ9Y6X4 670 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 PSME4Q14997 1843 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
LRRC28-216ENST00000559819 DCDC2CA8MYV0 355 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 HMGB1P1B2RPK0 211 aaPredicted RBP10.84□□□□□ -0.67
LRRC28-216ENST00000559819 MMEP08473 750 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 MAPTP10636 758 aaKnown RBP10.84□□□□□ -0.67
LRRC28-216ENST00000559819 PTENP60484 403 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 DR1Q01658 176 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 CXCL9Q07325 125 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 NSMFQ6X4W1 530 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 MCF2L2Q86YR7 1114 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 ZDHHC14Q8IZN3 488 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 EIF1ADQ8N9N8 165 aaKnown RBP10.84□□□□□ -0.67
LRRC28-216ENST00000559819 BSNDQ8WZ55 320 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 PSMD1Q99460 953 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 TSPYL1Q9H0U9 437 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 CARD9Q9H257 536 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 SLC38A10Q9HBR0 1119 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 ATP8A1Q9Y2Q0 1164 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 SNX24Q9Y343 169 aa10.84□□□□□ -0.67
LRRC28-216ENST00000559819 GOLGA6L10A6NI86 522 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 COMTP21964 271 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms