RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 CPB2Q96IY4 423 aa29■■■□□ 2.23
CHPT1-204ENST00000549128 BUD13Q9BRD0 619 aaKnown RBP eCLIP29■■■□□ 2.23
CHPT1-204ENST00000549128 ST6GALNAC4Q9H4F1 302 aa29■■■□□ 2.23
CHPT1-204ENST00000549128 PRMT7Q9NVM4 692 aaPredicted RBP29■■■□□ 2.23
CHPT1-204ENST00000549128 PHLPP2Q6ZVD8 1323 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 ACKR2O00590 384 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 ERLIN2O94905 339 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 RHOBTB3O94955 611 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 NFKBIBQ15653 356 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 FAM187BQ17R55 369 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 TMEM240Q5SV17 173 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 NT5DC1Q5TFE4 455 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 CNKSR3Q6P9H4 555 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 CDR2LQ86X02 465 aaPredicted RBP28.99■■■□□ 2.23
CHPT1-204ENST00000549128 LINC01599Q8WXQ3 324 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 SMARCE1Q969G3 411 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 GDF15Q99988 308 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 NUP62CLQ9H1M0 184 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 IKZF4Q9H2S9 585 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 AGPAT5Q9NUQ2 364 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 TBX20Q9UMR3 447 aa28.99■■■□□ 2.23
CHPT1-204ENST00000549128 PFKMP08237 780 aa28.98■■■□□ 2.23
CHPT1-204ENST00000549128 ARF4P18085 180 aaPredicted RBP28.98■■■□□ 2.23
CHPT1-204ENST00000549128 KCNB1Q14721 858 aa28.98■■■□□ 2.23
CHPT1-204ENST00000549128 OTOP2Q7RTS6 562 aa28.98■■■□□ 2.23
CHPT1-204ENST00000549128 KIAA0895Q8NCT3 520 aa28.98■■■□□ 2.23
CHPT1-204ENST00000549128 KCNN1Q92952 543 aa28.98■■■□□ 2.23
CHPT1-204ENST00000549128 PIN4Q9Y237 131 aaKnown RBP28.98■■■□□ 2.23
CHPT1-204ENST00000549128 PRPF6O94906 941 aaKnown RBP28.97■■■□□ 2.23
CHPT1-204ENST00000549128 SMC2O95347 1197 aa28.97■■■□□ 2.23
CHPT1-204ENST00000549128 DSC3Q14574 896 aa28.97■■■□□ 2.23
CHPT1-204ENST00000549128 ISM2Q6H9L7 571 aa28.97■■■□□ 2.23
CHPT1-204ENST00000549128 PRIMPOLQ96LW4 560 aa28.97■■■□□ 2.23
CHPT1-204ENST00000549128 GSDMAQ96QA5 445 aa28.97■■■□□ 2.23
CHPT1-204ENST00000549128 RANBP2P49792 3224 aaKnown RBP28.97■■■□□ 2.23
CHPT1-204ENST00000549128 H0YCG3 227 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 FGBP02675 491 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 PRPF4BQ13523 1007 aaKnown RBP28.96■■■□□ 2.23
CHPT1-204ENST00000549128 EPM2AIP1Q7L775 607 aaPredicted RBP28.96■■■□□ 2.23
CHPT1-204ENST00000549128 APBB2Q92870 758 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 ADAM2Q99965 735 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 TARS2Q9BW92 718 aaKnown RBP28.96■■■□□ 2.23
CHPT1-204ENST00000549128 KIAA1468Q9P260 1216 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 MAN1B1Q9UKM7 699 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 GDAQ9Y2T3 454 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 HOXD13P35453 343 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 STRN3Q13033 797 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 PSMD2Q13200 908 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 PCBP1Q15365 356 aaKnown RBP eCLIP28.96■■■□□ 2.239e-11■■■■□ 20
CHPT1-204ENST00000549128 SLC17A8Q8NDX2 589 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 TMEM63CQ9P1W3 806 aa28.96■■■□□ 2.23
CHPT1-204ENST00000549128 CNTNAP2Q9UHC6 1331 aa28.95■■■□□ 2.23
CHPT1-204ENST00000549128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.95■■■□□ 2.22
CHPT1-204ENST00000549128 IKBKEQ14164 716 aa28.95■■■□□ 2.22
CHPT1-204ENST00000549128 C9orf50Q5SZB4 431 aa28.95■■■□□ 2.22
CHPT1-204ENST00000549128 MAP4K3Q8IVH8 894 aa28.95■■■□□ 2.22
CHPT1-204ENST00000549128 SMYD4Q8IYR2 804 aaPredicted RBP28.95■■■□□ 2.22
CHPT1-204ENST00000549128 SCFD1Q8WVM8 642 aa28.95■■■□□ 2.22
CHPT1-204ENST00000549128 CCDC47Q96A33 483 aaKnown RBP28.95■■■□□ 2.22
CHPT1-204ENST00000549128 PCDHB13Q9Y5F0 798 aa28.95■■■□□ 2.22
CHPT1-204ENST00000549128 BIN1O00499 593 aa28.94■■■□□ 2.22
CHPT1-204ENST00000549128 ENPP3O14638 875 aa28.94■■■□□ 2.22
CHPT1-204ENST00000549128 EEF1DP3Q658K8 133 aa28.94■■■□□ 2.22
CHPT1-204ENST00000549128 PSRC1Q6PGN9 363 aaPredicted RBP28.94■■■□□ 2.22
CHPT1-204ENST00000549128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.94■■■□□ 2.222e-8■■□□□ 14.5
CHPT1-204ENST00000549128 ACO2Q99798 780 aaKnown RBP28.94■■■□□ 2.22
CHPT1-204ENST00000549128 A0A1B0GUA9 196 aa28.93■■■□□ 2.22
CHPT1-204ENST00000549128 TISP43B9A030 160 aa28.93■■■□□ 2.22
CHPT1-204ENST00000549128 ZSCAN20P17040 1043 aaPredicted RBP28.93■■■□□ 2.22
CHPT1-204ENST00000549128 L1TD1Q5T7N2 865 aaKnown RBP28.93■■■□□ 2.22
CHPT1-204ENST00000549128 ZNF507Q8TCN5 953 aa28.93■■■□□ 2.22
CHPT1-204ENST00000549128 ZBTB45Q96K62 511 aaPredicted RBP28.93■■■□□ 2.22
CHPT1-204ENST00000549128 FTHL17Q9BXU8 183 aa28.93■■■□□ 2.22
CHPT1-204ENST00000549128 MRPL4Q9BYD3 311 aaKnown RBP28.93■■■□□ 2.22
CHPT1-204ENST00000549128 TSPYL2Q9H2G4 693 aaPredicted RBP28.93■■■□□ 2.22
CHPT1-204ENST00000549128 PDZD7Q9H5P4 517 aa28.93■■■□□ 2.22
CHPT1-204ENST00000549128 CHST12Q9NRB3 414 aa28.93■■■□□ 2.22
CHPT1-204ENST00000549128 CXXC1Q9P0U4 656 aaPredicted RBP28.93■■■□□ 2.22
CHPT1-204ENST00000549128 PTMSP20962 102 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 BMP6P22004 513 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 KLHL40Q2TBA0 621 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 UBXN11Q5T124 520 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 UBE2OQ9C0C9 1292 aaKnown RBP28.92■■■□□ 2.22
CHPT1-204ENST00000549128 RGS18Q9NS28 235 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 RMND1Q9NWS8 449 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 MAPK8IP1Q9UQF2 711 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 ANKRD63C9JTQ0 380 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 SCP2P22307 547 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 AXLP30530 894 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 ALCAMQ13740 583 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 SHHQ15465 462 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 TMEM132AQ24JP5 1023 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 ATF7IP2Q5U623 682 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 TWF2Q6IBS0 349 aaKnown RBP28.92■■■□□ 2.22
CHPT1-204ENST00000549128 CAVIN1Q6NZI2 390 aaKnown RBP28.92■■■□□ 2.22
CHPT1-204ENST00000549128 SLC39A4Q6P5W5 647 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 NOTUMQ6P988 496 aa28.92■■■□□ 2.22
CHPT1-204ENST00000549128 EIF2AQ9BY44 585 aaKnown RBP28.92■■■□□ 2.22
CHPT1-204ENST00000549128 ABHD14A-ACY1A0A1B0GW23 586 aa28.91■■■□□ 2.22
CHPT1-204ENST00000549128 ABLIM1O14639 778 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms