RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LSP1P33241 339 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 GPC5P78333 572 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 POU5F1Q01860 360 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 CPXCR1Q8N123 301 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 UBL4BQ8N7F7 174 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 TTLL6Q8N841 843 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 MTMR14Q8NCE2 650 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 SLC17A8Q8NDX2 589 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 DPH5Q9H2P9 285 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 ANKRD65E5RJM6 399 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 H0YGN5 161 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 WDR46O15213 610 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 ERLIN2O94905 339 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 USP8P40818 1118 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 MXI1P50539 228 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 DR1Q01658 176 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 GUCY1A3Q02108 690 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 BIRC3Q13489 604 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 C11orf63Q6NUN7 778 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 B4GALNT4Q76KP1 1039 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 RPUSD2Q8IZ73 545 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 ZNF277Q9NRM2 450 aaPredicted RBP19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 MAP3K20Q9NYL2 800 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 ALG6Q9Y672 507 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 NFS1Q9Y697 457 aa19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 MDH1P40925 334 aaKnown RBP19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 GHRHRQ02643 423 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 TMC3Q7Z5M5 1100 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 LPAR1Q92633 364 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 EPN3Q9H201 632 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 BCS1LQ9Y276 419 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 FAM170AA1A519 330 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 RTN2O75298 545 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 PEX3P56589 373 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 MRPS9P82933 396 aaKnown RBP19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 ZNF844Q08AG5 666 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 TCEAL1Q15170 157 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 C4orf19Q8IY42 314 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 AGBL3Q8NEM8 1001 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 OR2W6PQ8NHA6 318 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 SYTL5Q8TDW5 730 aaPredicted RBP19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 EXOC7Q9UPT5 735 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 FAM169AQ9Y6X4 670 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 SYNGAP1Q96PV0 1343 aa19.36■□□□□ 0.69
CCHCR1-228ENST00000509552 FAM187AA6NFU0 413 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 PMM2O15305 246 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 SLC16A4O15374 487 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 HPDP32754 393 aaPredicted RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 FLT3P36888 993 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 MAP3K10Q02779 954 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 DHX9Q08211 1270 aaKnown RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 ZNF211Q13398 564 aaPredicted RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 DHX34Q14147 1143 aaKnown RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 SAMD3Q8N6K7 520 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 TRIM51Q9BSJ1 452 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 NR2E1Q9Y466 385 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 A0A087WUV0 522 aaPredicted RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 HSPA6P17066 643 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 EIF2AK2P19525 551 aaKnown RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 JAK3P52333 1124 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 NCKAP1LP55160 1127 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 PSMC5P62195 406 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 C1orf220Q5T0J3 134 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 ADAT2Q7Z6V5 191 aaKnown RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 FMO2Q99518 471 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 ERP44Q9BS26 406 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 TRIM31Q9BZY9 425 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 TMEM117Q9H0C3 514 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 RASAL2Q9UJF2 1139 aa19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 CTDP1Q9Y5B0 961 aaPredicted RBP19.35■□□□□ 0.69
CCHCR1-228ENST00000509552 BACH1O14867 736 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 SMTNP53814 917 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 FAM102BQ5T8I3 360 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 SPATS2Q86XZ4 545 aaKnown RBP19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 ALG3Q92685 438 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 SH2D3AQ9BRG2 576 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 TMOD4Q9NZQ9 345 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 USP20Q9Y2K6 914 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 ASTN2O75129 1339 aaPredicted RBP19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 TULP1O00294 542 aaPredicted RBP19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 GZMAP12544 262 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 VCAM1P19320 739 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 MFAP3P55082 362 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 PTGISQ16647 500 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 XKR9Q5GH70 373 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 SPDYCQ5MJ68 293 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 AGBL2Q5U5Z8 902 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 MORC4Q8TE76 937 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 TAAR1Q96RJ0 339 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 RPS6KC1Q96S38 1066 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 SLC38A10Q9HBR0 1119 aa19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 BCCIPQ9P287 314 aaKnown RBP eCLIP19.34■□□□□ 0.69
CCHCR1-228ENST00000509552 SRRM3A6NNA2 597 aaPredicted RBP19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 WDR64B1ANS9 1081 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 MYO1FO00160 1098 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 SGPL1O95470 568 aa19.33■□□□□ 0.69
CCHCR1-228ENST00000509552 MYCLP12524 364 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms