RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ADAT2Q7Z6V5 191 aaKnown RBP19.1■□□□□ 0.65
NUP54-205ENST00000507257 SLF2Q8IX21 1173 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 KIRREL3Q8IZU9 778 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 ADAM22Q9P0K1 906 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 CD2APQ9Y5K6 639 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 GAKO14976 1311 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 GREB1LQ9C091 1923 aaPredicted RBP19.09■□□□□ 0.65
NUP54-205ENST00000507257 A6NHS1 94 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 ECM2O94769 699 aaPredicted RBP19.09■□□□□ 0.65
NUP54-205ENST00000507257 CCNHP51946 323 aaPredicted RBP19.09■□□□□ 0.65
NUP54-205ENST00000507257 CTTNQ14247 550 aaKnown RBP19.09■□□□□ 0.65
NUP54-205ENST00000507257 ANKRD20A2Q5SQ80 823 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 ANKRD20A1Q5TYW2 823 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 ANKRD20A3Q5VUR7 823 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 TBC1D9BQ66K14 1250 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 NUGGCQ68CJ6 796 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 NAIF1Q69YI7 327 aaPredicted RBP19.09■□□□□ 0.65
NUP54-205ENST00000507257 ZDHHC14Q8IZN3 488 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 ZNF483Q8TF39 744 aaPredicted RBP19.09■□□□□ 0.65
NUP54-205ENST00000507257 CD101Q93033 1021 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 ANO3Q9BYT9 981 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 GPCPD1Q9NPB8 672 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 TMOD4Q9NZQ9 345 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 DBR1Q9UK59 544 aaKnown RBP19.09■□□□□ 0.65
NUP54-205ENST00000507257 PCDHB13Q9Y5F0 798 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 ACTL7BQ9Y614 415 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 ZMYM2Q9UBW7 1377 aa19.09■□□□□ 0.65
NUP54-205ENST00000507257 UNC5CO95185 931 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 GCNT3O95395 438 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 RRP1BQ14684 758 aaKnown RBP19.08■□□□□ 0.65
NUP54-205ENST00000507257 LRRC47Q8N1G4 583 aaKnown RBP19.08■□□□□ 0.65
NUP54-205ENST00000507257 FITM2Q8N6M3 262 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 C7orf43Q8WVR3 580 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 SAAL1Q96ER3 474 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 MAGEB18Q96M61 343 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 FAM20AQ96MK3 541 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 AGPAT1Q99943 283 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 POLR3CQ9BUI4 534 aaPredicted RBP19.08■□□□□ 0.65
NUP54-205ENST00000507257 LRRC19Q9H756 370 aa19.08■□□□□ 0.65
NUP54-205ENST00000507257 TBCAO75347 108 aaKnown RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 EYA4O95677 639 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 GCKP35557 465 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 SLCO1A2P46721 670 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 PSMC6P62333 389 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 CALCOCO2Q13137 446 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 PABPC4Q13310 644 aaKnown RBP eCLIP19.08■□□□□ 0.64
NUP54-205ENST00000507257 SIX1Q15475 284 aaPredicted RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 UBAP2Q5T6F2 1119 aaKnown RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 RHBDF2Q6PJF5 856 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 SYDE1Q6ZW31 735 aaPredicted RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 ERICH1Q86X53 443 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 SLC13A5Q86YT5 568 aaPredicted RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 CFAP61Q8NHU2 1237 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 INTS2Q9H0H0 1204 aaKnown RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 CDC42EP4Q9H3Q1 356 aaKnown RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 SLC24A3Q9HC58 644 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 TXLNGQ9NUQ3 528 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 SPATS2LQ9NUQ6 558 aaKnown RBP19.08■□□□□ 0.64
NUP54-205ENST00000507257 DMAC2Q9NW81 257 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 KLHL14Q9P2G3 628 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 LGALS13Q9UHV8 139 aa19.08■□□□□ 0.64
NUP54-205ENST00000507257 STAT3P40763 770 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 GPC5P78333 572 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 MTFR1Q15390 333 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 MIGA2Q7L4E1 593 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 SH3TC2Q8TF17 1288 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 KRT35Q92764 455 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 CCDC113Q9H0I3 377 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 TAS2R14Q9NYV8 317 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 CTNNAL1Q9UBT7 734 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 LRRC42Q9Y546 428 aa19.07■□□□□ 0.64
NUP54-205ENST00000507257 ADGRA3Q8IWK6 1321 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 CNTNAP4Q9C0A0 1308 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 CLIC2O15247 247 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 ITIH2P19823 946 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 KCTD19Q17RG1 926 aaPredicted RBP19.06■□□□□ 0.64
NUP54-205ENST00000507257 ARHGEF18Q6ZSZ5 1173 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 FBF1Q8TES7 1133 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 PRCCQ92733 491 aaPredicted RBP19.06■□□□□ 0.64
NUP54-205ENST00000507257 AAASQ9NRG9 546 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 RPL26L1Q9UNX3 145 aaKnown RBP19.06■□□□□ 0.64
NUP54-205ENST00000507257 ECEL1O95672 775 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 CAV1Q03135 178 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 MYBPC2Q14324 1141 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 SPDYAQ5MJ70 313 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 PPP1R21Q6ZMI0 780 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 CCDC105Q8IYK2 499 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 TMEM237Q96Q45 408 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 LRMDAQ9H2I8 198 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 CTTNBP2NLQ9P2B4 639 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 SEL1LQ9UBV2 794 aa19.06■□□□□ 0.64
NUP54-205ENST00000507257 BCRP11274 1271 aa19.05■□□□□ 0.64
NUP54-205ENST00000507257 MAN1A1P33908 653 aa19.05■□□□□ 0.64
NUP54-205ENST00000507257 CCDC38Q502W7 563 aa19.05■□□□□ 0.64
NUP54-205ENST00000507257 AADACL2Q6P093 401 aa19.05■□□□□ 0.64
NUP54-205ENST00000507257 NBPF5PQ86XG9 351 aaPredicted RBP19.05■□□□□ 0.64
NUP54-205ENST00000507257 SPICE1Q8N0Z3 855 aa19.05■□□□□ 0.64
NUP54-205ENST00000507257 AGGF1Q8N302 714 aaeCLIP19.05■□□□□ 0.64
NUP54-205ENST00000507257 INPP5DQ92835 1189 aa19.05■□□□□ 0.64
NUP54-205ENST00000507257 SETDB2Q96T68 719 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms