RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 KLRC4O43908 158 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 CEP104O60308 925 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 UPP2O95045 317 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 GSTT1P30711 240 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 PTDSS1P48651 473 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 RASSF2P50749 326 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 DLGAP5Q15398 846 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZNF174Q15697 407 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 NOL9Q5SY16 702 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 IFNL1Q8IU54 200 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ANKS1AQ92625 1134 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZNF333Q96JL9 665 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 TEPSINQ96N21 525 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZCWPW1Q9H0M4 648 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 CUEDC2Q9H467 287 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 MMRN2Q9H8L6 949 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 DISC1Q9NRI5 854 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 GALNT8Q9NY28 637 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 DENND2AQ9ULE3 1009 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ATP8A1Q9Y2Q0 1164 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 COMMD3-BMI1R4GMX3 469 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 KRIT1O00522 736 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 SHBGP04278 402 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 MYBL1P10243 752 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 KLRC1P26715 233 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 HOXA7P31268 230 aaPredicted RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 IREB2P48200 963 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 DNA2P51530 1060 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 OCRLQ01968 901 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 KPNB1Q14974 876 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 PRPF38BQ5VTL8 546 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 HGSNATQ68CP4 663 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 HHIPL2Q6UWX4 724 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 MAEAQ7L5Y9 396 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 FITM2Q8N6M3 262 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 STKLD1Q8NE28 680 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZDHHC15Q96MV8 337 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 FAM207AQ9NSI2 230 aaPredicted RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 CEP126Q9P2H0 1117 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZNF510Q9Y2H8 683 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 NOC2LQ9Y3T9 749 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 PTPRFP10586 1907 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ATP8B3O60423 1300 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 FAM205CA6NFA0 338 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ATP6V1G1O75348 118 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 TMCC1O94876 653 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ECEL1O95672 775 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 EYA4O95677 639 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ATP5DP30049 168 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ADD2P35612 726 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 PMS2P54278 862 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 CACNA2D1P54289 1103 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 RNASE9P60153 205 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 MAP3K10Q02779 954 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 SLC18A3Q16572 532 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 TNFAIP8L3Q5GJ75 292 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 INTS8Q75QN2 995 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 LONP2Q86WA8 852 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 RNF168Q8IYW5 571 aaPredicted RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ANKRD13AQ8IZ07 590 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 RASGEF1CQ8N431 466 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 FANCBQ8NB91 859 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 DDX47Q9H0S4 455 aaKnown RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 DEFB129Q9H1M3 183 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 AZI2Q9H6S1 392 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZSWIM5Q9P217 1185 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZNF112Q9UJU3 913 aa7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ZMYND8Q9ULU4 1186 aaPredicted RBP7.6□□□□□ -1.19
EPHA3-203ENST00000494014 ADGRA2Q96PE1 1338 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 CETN3O15182 167 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 IFNAR2P48551 515 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 SCNN1BP51168 640 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 UBE3CQ15386 1083 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 SPDYAQ5MJ70 313 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 SFMBT2Q5VUG0 894 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 TNFRSF25Q93038 417 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 UTP4Q969X6 686 aaKnown RBP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 NR1H4Q96RI1 486 aaPredicted RBP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 ROPN1BQ9BZX4 212 aaPredicted RBP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 ROPN1Q9HAT0 212 aaPredicted RBP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 FGFR1OP2Q9NVK5 253 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 IL1RAPL1Q9NZN1 696 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 CEP72Q9P209 647 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 PNMA3Q9UL41 463 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 USP20Q9Y2K6 914 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 SLC45A1Q9Y2W3 748 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 FAM187AA6NFU0 413 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 TCP11X1B4DZS4 312 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 HNRNPCL1O60812 293 aaKnown RBP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 USP2O75604 605 aaPredicted RBP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 TJP3O95049 919 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 KLRK1P26718 216 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 SERPINB4P48594 390 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 PABPC4Q13310 644 aaKnown RBP eCLIP7.59□□□□□ -1.19
EPHA3-203ENST00000494014 TMED1Q13445 227 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 RCN2Q14257 317 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 ARHGEF6Q15052 776 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 CLUL1Q15846 466 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 FOXB2Q5VYV0 432 aa7.59□□□□□ -1.19
EPHA3-203ENST00000494014 ANKRD40Q6AI12 368 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms