RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 HGSNATQ68CP4 663 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 MAMDC4Q6UXC1 1216 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 INTS8Q75QN2 995 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 C12orf56Q8IXR9 622 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 CCDC170Q8IYT3 715 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 METTL13Q8N6R0 699 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 ATP8B4Q8TF62 1192 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZBTB45Q96K62 511 aaPredicted RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 FAM213AQ9BRX8 229 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 SMARCAD1Q9H4L7 1026 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 VTA1Q9NP79 307 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 PLCB1Q9NQ66 1216 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 FAM170AA1A519 330 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 MANSC4A6NHS7 340 aaPredicted RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 EIF3CLB5ME19 914 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 MAFO75444 373 aaPredicted RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 GH1P01241 217 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 EDN1P05305 212 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 HARSP12081 509 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 NAMPTP43490 491 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 KRT83P78385 493 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 CDK17Q00537 523 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 SPA17Q15506 151 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 ASIC2Q16515 512 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 CCDC122Q5T0U0 273 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 IQCEQ6IPM2 695 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 PLPPR4Q7Z2D5 763 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 PPP1R13LQ8WUF5 828 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 JAKMIP2Q96AA8 810 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 ELMO3Q96BJ8 720 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 EIF3CQ99613 913 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 TINF2Q9BSI4 451 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 LACRTQ9GZZ8 138 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 KATNBL1Q9H079 304 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 INTS2Q9H0H0 1204 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 TOPORSQ9NS56 1045 aaPredicted RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 ANKFY1Q9P2R3 1169 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 ABT1Q9ULW3 272 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 DUSP10Q9Y6W6 482 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
SMPD4P1-201ENST00000416717 SIP14410 1827 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 LOC102724159A0A0B4J2E5 919 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 LGALS2P05162 132 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 DLATP10515 647 aaKnown RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 CLCN3P51790 818 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 MAP2K1Q02750 393 aaPredicted RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 KLHL30Q0D2K2 578 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 LAMC2Q13753 1193 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 NAA30Q147X3 362 aaPredicted RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 PWP2Q15269 919 aaKnown RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 ARHGAP44Q17R89 818 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 SLC9C1Q4G0N8 1177 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 C1orf220Q5T0J3 134 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 RHPN2Q8IUC4 686 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 SLC35F6Q8N357 371 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 PPP1R16BQ96T49 567 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 TARS2Q9BW92 718 aaKnown RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 GTPBP10A4D1E9 387 aaKnown RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 SERPING1P05155 500 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 SMPD1P17405 629 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 ACOT2P49753 483 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 TERF1P54274 439 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 LAMTOR4Q0VGL1 99 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 ACVR2BQ13705 512 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 SEZ6Q53EL9 994 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 BRDTQ58F21 947 aaPredicted RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 IFNL1Q8IU54 200 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 NLRP4Q96MN2 994 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZIC5Q96T25 663 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 IFIH1Q9BYX4 1025 aaKnown RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 HAUS4Q9H6D7 363 aa11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 V9GYY5 206 aaPredicted RBP11.61□□□□□ -0.55
SMPD4P1-201ENST00000416717 MACROD2A1Z1Q3 448 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 SLC15A5A6NIM6 579 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 H0YCG3 227 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 ADCY6O43306 1168 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 GFPT2O94808 682 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 SNRPFP62306 86 aaKnown RBP11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 CCL14Q16627 93 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 LMBRD2Q68DH5 695 aaPredicted RBP11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 EFCAB12Q6NXP0 572 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 GPD1LQ8N335 351 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 RNF149Q8NC42 400 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 LENG1Q96BZ8 264 aaPredicted RBP11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 HAPLN2Q9GZV7 340 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 ERAP1Q9NZ08 941 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 FLRT1Q9NZU1 646 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 DNAJC12Q9UKB3 198 aa11.6□□□□□ -0.55
SMPD4P1-201ENST00000416717 PCDHA13Q9Y5I0 950 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms