RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 IFNL3Q8IZI9 196 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 DNAJB8Q8NHS0 232 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 TRIB2Q92519 343 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 LPAR1Q92633 364 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 USP6NLQ92738 828 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 SEC62Q99442 399 aaKnown RBP6.2□□□□□ -1.42
LINC00342-201ENST00000412393 KANSL2Q9H9L4 492 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 EPB41L4AQ9HCS5 686 aaPredicted RBP6.2□□□□□ -1.42
LINC00342-201ENST00000412393 CRTAC1Q9NQ79 661 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 BTBD7Q9P203 1132 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 STAP2Q9UGK3 403 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 IVNS1ABPQ9Y6Y0 642 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 RPTORQ8N122 1335 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 ZNF236Q9UL36 1845 aa6.2□□□□□ -1.42
LINC00342-201ENST00000412393 BRCA2P51587 3418 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 ROBO3Q96MS0 1386 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 MKI67P46013 3256 aaKnown RBP6.19□□□□□ -1.42
LINC00342-201ENST00000412393 CEP290O15078 2479 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 MCM3APO60318 1980 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 SLC15A5A6NIM6 579 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 PATL2C9JE40 543 aaKnown RBP6.19□□□□□ -1.42
LINC00342-201ENST00000412393 OFD1O75665 1012 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 FLOT1O75955 427 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 ZKSCAN1P17029 563 aaPredicted RBP6.19□□□□□ -1.42
LINC00342-201ENST00000412393 MCM5P33992 734 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 PDE1AP54750 535 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
LINC00342-201ENST00000412393 PTPN11Q06124 597 aaPredicted RBP6.19□□□□□ -1.42
LINC00342-201ENST00000412393 PDE4BQ07343 736 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 PLS1Q14651 629 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 CCL14Q16627 93 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 SV2BQ7L1I2 683 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 UBE2Q1Q7Z7E8 422 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 ZNF444Q8N0Y2 327 aaPredicted RBP6.19□□□□□ -1.42
LINC00342-201ENST00000412393 SPICE1Q8N0Z3 855 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 MB21D1Q8N884 522 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 DTWD2Q8NBA8 298 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 LINC01599Q8WXQ3 324 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 DPF3Q92784 378 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 EVI5LQ96CN4 794 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 ATG4CQ96DT6 458 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 APBA2Q99767 749 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 HTATIP2Q9BUP3 242 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 MOV10L1Q9BXT6 1211 aaKnown RBP6.19□□□□□ -1.42
LINC00342-201ENST00000412393 NACAP1Q9BZK3 213 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 LNPKQ9C0E8 428 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 NAPBQ9H115 298 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 GRPEL1Q9HAV7 217 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 ZNF287Q9HBT7 754 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 PCDHA11Q9Y5I1 949 aa6.19□□□□□ -1.42
LINC00342-201ENST00000412393 PNMA6FA0A0J9YX94 578 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 STRNO43815 780 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 PRDM1O75626 825 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 SLC3A2P08195 630 aaKnown RBP6.18□□□□□ -1.42
LINC00342-201ENST00000412393 ERCC3P19447 782 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 RPS26P62854 115 aaKnown RBP6.18□□□□□ -1.42
LINC00342-201ENST00000412393 PPARAQ07869 468 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 CACNB2Q08289 660 aaPredicted RBP6.18□□□□□ -1.42
LINC00342-201ENST00000412393 GRB14Q14449 540 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 DSC3Q14574 896 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 FAM83BQ5T0W9 1011 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 MAP3K21Q5TCX8 1036 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 MFSD14CQ5VZR4 134 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 CCDC129Q6ZRS4 1044 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 TMC7Q7Z402 723 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 SHCBP1Q8NEM2 672 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 PAWRQ96IZ0 340 aaKnown RBP6.18□□□□□ -1.42
LINC00342-201ENST00000412393 TMEM87BQ96K49 555 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 SPATC1LQ9H0A9 340 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 MROH8Q9H579 483 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 FBXO28Q9NVF7 368 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 NYAP2Q9P242 653 aa6.18□□□□□ -1.42
LINC00342-201ENST00000412393 IGKV6D-41A0A0C4DH26 115 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 WASH4PA8MWX3 477 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 F5H6K3 240 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 H0YGN5 161 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 GFRA2O00451 464 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 ZNF500O60304 480 aaPredicted RBP6.17□□□□□ -1.42
LINC00342-201ENST00000412393 FBXO24O75426 580 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 HOXC6P09630 235 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 TSPY3P0CV98 308 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 TSPY8P0CW00 308 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 ADORA2AP29274 412 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 CCND3P30281 292 aaPredicted RBP6.17□□□□□ -1.42
LINC00342-201ENST00000412393 PLCB3Q01970 1234 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 KLRC3Q07444 240 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 CCDC173Q0VFZ6 552 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 ADGRF1Q5T601 910 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 NECAB2Q7Z6G3 386 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 DPP9Q86TI2 863 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 NLRX1Q86UT6 975 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 CHD1LQ86WJ1 897 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 SKAP1Q86WV1 359 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 RIOX2Q8IUF8 465 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 MCATQ8IVS2 390 aaKnown RBP6.17□□□□□ -1.42
LINC00342-201ENST00000412393 NPLOC4Q8TAT6 608 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 FEZF2Q8TBJ5 459 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 CEP95Q96GE4 821 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 NUP88Q99567 741 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms