RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 APBB1IPQ7Z5R6 666 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ARHGAP30Q7Z6I6 1101 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 FILIP1Q7Z7B0 1213 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RBM23Q86U06 439 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 OAFQ86UD1 273 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DTX2Q86UW9 622 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 MARCH9Q86YJ5 346 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 THNSL2Q86YJ6 484 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP11-1Q8IUC1 163 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP7-1Q8IUC3 87 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RIOX2Q8IUF8 465 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF547Q8IVP9 402 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DCUN1D3Q8IWE4 304 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 C11orf53Q8IXP5 236 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SLFN12Q8IYM2 578 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KIR2DL5AQ8N109 375 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 FBXL14Q8N1E6 418 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 MUC20Q8N307 709 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GALNT16Q8N428 558 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 IQCF1Q8N6M8 205 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 AMER3Q8N944 861 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PJA1Q8NG27 643 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TTLL11Q8NHH1 800 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PPP1R14CQ8TAE6 165 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GRIN3AQ8TCU5 1115 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SSH3Q8TE77 659 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM222BQ8WU58 562 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 BBXQ8WY36 941 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ST8SIA2Q92186 375 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 LPPQ93052 612 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GAL3ST3Q96A11 431 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RFT1Q96AA3 541 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ARL8AQ96BM9 186 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SCMH1Q96GD3 660 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RADILQ96JH8 1075 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CCDC74BQ96LY2 380 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 Q96MF0 132 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CAMK1GQ96NX5 476 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DUX3Q96PT4 197 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 NODALQ96S42 347 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ATOH8Q96SQ7 321 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ADAM2Q99965 735 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TCF25Q9BQ70 676 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 EBF4Q9BQW3 602 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 AIFM2Q9BRQ8 373 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 NDC1Q9BTX1 674 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ARHGAP39Q9C0H5 1083 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 C6orf106Q9H6K1 298 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RMI1Q9H9A7 625 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TCF7L1Q9HCS4 588 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RPS10P5Q9NQ39 176 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CASS4Q9NQ75 786 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PRDM8Q9NQV8 689 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PDGFCQ9NRA1 345 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ABCB10Q9NRK6 738 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TBCCD1Q9NVR7 557 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GFOD1Q9NXC2 390 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 HSPBP1Q9NZL4 362 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 NCKIPSDQ9NZQ3 722 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM30AQ9NZY2 134 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GULP1Q9UBP9 304 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM184BQ9ULE4 1060 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CYP8B1Q9UNU6 501 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GAB2Q9UQC2 676 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CHST2Q9Y4C5 530 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF451Q9Y4E5 1061 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PCDHB4Q9Y5E5 795 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SORL1Q92673 2214 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SOS1Q07889 1333 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 FRMPD2Q68DX3 1309 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 RUSC2Q8N2Y8 1516 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 KIR2DS1A0A191URI9 304 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 A0A1W2PPI3 338 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 TCRBV5S2A0A599 114 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 UBE2QL1A1L167 161 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 HMX3A6NHT5 357 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF839A8K0R7 811 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 GOLGA8BA8MQT2 603 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 BTBD18B2RXH4 712 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 C22orf46C9J442 243 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 GCOM1H8Y6P7 765 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 GFRA2O00451 464 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 TPP1O14773 563 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 SPTLC2O15270 562 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 MYO1BO43795 1136 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 PEX1O43933 1283 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 MAFKO60675 156 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 GADD45BO75293 160 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 PAPSS2O95340 614 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 IGKV3-15P01624 115 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 IGLV2-11P01706 119 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 IGKV3-11P04433 115 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 NEFLP07196 543 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 CD3EP07766 207 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 ENO2P09104 434 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 P0C879 139 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 PRKCSHP14314 528 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 ZSCAN20P17040 1043 aaPredicted RBP-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF32P17041 273 aa-0.13□□□□□ -2.43
TRAJ28-201ENST00000390509 HK1P19367 917 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms