RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 PABPC4Q13310 644 aaKnown RBP eCLIP25.64■■□□□ 1.74e-7■■□□□ 13.3
CCND3-202ENST00000372988 TAF11Q15544 211 aa25.64■■□□□ 1.7
CCND3-202ENST00000372988 LRRC47Q8N1G4 583 aaKnown RBP25.64■■□□□ 1.7
CCND3-202ENST00000372988 LRRC42Q9Y546 428 aa25.64■■□□□ 1.7
CCND3-202ENST00000372988 CYP3A7-CYP3A51PA0A087WV96 503 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 TGFB1I1O43294 461 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 TTLL1O95922 423 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 CYP3A7P24462 503 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 ATP5DP30049 168 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 FMO5P49326 533 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 KCNA1Q09470 495 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 ACVR2BQ13705 512 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 KIF22Q14807 665 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 RAB3IPQ96QF0 476 aaPredicted RBP25.64■■□□□ 1.69
CCND3-202ENST00000372988 PSTPIP2Q9H939 334 aa25.64■■□□□ 1.69
CCND3-202ENST00000372988 PASKQ96RG2 1323 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 XIRP1Q702N8 1843 aaKnown RBP25.63■■□□□ 1.69
CCND3-202ENST00000372988 RSPH10B2B2RC85 870 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 RSPH10BP0C881 870 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 SPATA31C1P0DKV0 1188 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 SIX1Q15475 284 aaPredicted RBP25.63■■□□□ 1.69
CCND3-202ENST00000372988 CCDC25Q86WR0 208 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 FAM186BQ8IYM0 893 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 ANKRD42Q8N9B4 389 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 RPS6KC1Q96S38 1066 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 MLXIPLQ9NP71 852 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 USP40Q9NVE5 1235 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 DNM3Q9UQ16 869 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 TCRBV7S2A1N4TA0A589 114 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 MEIS1O00470 390 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 TP73O15350 636 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 CTTNQ14247 550 aaKnown RBP25.63■■□□□ 1.69
CCND3-202ENST00000372988 SEL1L2Q5TEA6 688 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 ECHDC2Q86YB7 292 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 GDAP1Q8TB36 358 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 KCNV2Q8TDN2 545 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 TGS1Q96RS0 853 aaKnown RBP25.63■■□□□ 1.69
CCND3-202ENST00000372988 FAM167BQ9BTA0 163 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 BCAS3Q9H6U6 928 aa25.63■■□□□ 1.69
CCND3-202ENST00000372988 NKX1-2Q9UD57 310 aaPredicted RBP25.63■■□□□ 1.69
CCND3-202ENST00000372988 FAM170AA1A519 330 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 GH1P01241 217 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 TRHP20396 242 aaPredicted RBP25.62■■□□□ 1.69
CCND3-202ENST00000372988 PSMC2P35998 433 aaKnown RBP25.62■■□□□ 1.69
CCND3-202ENST00000372988 ZNF543Q08ER8 600 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 PARP6Q2NL67 630 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
CCND3-202ENST00000372988 CCDC105Q8IYK2 499 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 SLFN12Q8IYM2 578 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 OSBPL1AQ9BXW6 950 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 KCNK9Q9NPC2 374 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 KLHL14Q9P2G3 628 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 SBF2Q86WG5 1849 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 ZMYM2Q9UBW7 1377 aa25.62■■□□□ 1.69
CCND3-202ENST00000372988 ENO4A6NNW6 628 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 GCNT3O95395 438 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 MTFR1Q15390 333 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 NFIL3Q16649 462 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 C12orf50Q8NA57 414 aaPredicted RBP25.61■■□□□ 1.69
CCND3-202ENST00000372988 MAGEB18Q96M61 343 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 AGPAT1Q99943 283 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 INTS2Q9H0H0 1204 aaKnown RBP25.61■■□□□ 1.69
CCND3-202ENST00000372988 SEPT11Q9NVA2 429 aaKnown RBP25.61■■□□□ 1.69
CCND3-202ENST00000372988 PTPN22Q9Y2R2 807 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 GPR75-ASB3A0A0A6YYF3 556 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 ACSL3O95573 720 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 PYGMP11217 842 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 RPA1P27694 616 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 SLC13A5Q86YT5 568 aaPredicted RBP25.61■■□□□ 1.69
CCND3-202ENST00000372988 CD101Q93033 1021 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 NLRP3Q96P20 1036 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 YIPF3Q9GZM5 350 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 ETNK1Q9HBU6 452 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 CTTNBP2NLQ9P2B4 639 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 CTNNAL1Q9UBT7 734 aa25.61■■□□□ 1.69
CCND3-202ENST00000372988 IGKV6D-41A0A0C4DH26 115 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 ANKRD33BA6NCL7 494 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 HIP1RO75146 1068 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 CBWD6Q4V339 395 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 CMPK2Q5EBM0 449 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 CBWD3Q5JTY5 395 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 CBWD5Q5RIA9 395 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 RHBDF2Q6PJF5 856 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 BICDL1Q6ZP65 573 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 MIGA2Q7L4E1 593 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 EGFL6Q8IUX8 553 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 SPDYE1Q8NFV5 336 aaPredicted RBP25.6■■□□□ 1.69
CCND3-202ENST00000372988 C7orf43Q8WVR3 580 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 RNPEPL1Q9HAU8 725 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 TXLNGQ9NUQ3 528 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 APEX2Q9UBZ4 518 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 FOXO6A8MYZ6 492 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 E7ENQ6 273 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 BRAFP15056 766 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 COMTP21964 271 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 TTBK2Q6IQ55 1244 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 ETNPPLQ8TBG4 499 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 GRAMD1AQ96CP6 724 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 RUSC1Q9BVN2 902 aa25.6■■□□□ 1.69
CCND3-202ENST00000372988 LRMDAQ9H2I8 198 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms