RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 KIF22Q14807 665 aa27.61■■■□□ 2.01
RAB40C-201ENST00000248139 EPN3Q9H201 632 aa27.61■■■□□ 2.01
RAB40C-201ENST00000248139 LARSQ9P2J5 1176 aaKnown RBP27.61■■■□□ 2.01
RAB40C-201ENST00000248139 TADA2BQ86TJ2 420 aa27.61■■■□□ 2.01
RAB40C-201ENST00000248139 ZDHHC14Q8IZN3 488 aa27.61■■■□□ 2.01
RAB40C-201ENST00000248139 PLSCR1O15162 318 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 ADRB2P07550 413 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 MYCLP12524 364 aaPredicted RBP27.6■■■□□ 2.01
RAB40C-201ENST00000248139 DR1Q01658 176 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 HAUS6Q7Z4H7 955 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 OGFOD1Q8N543 542 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 UHMK1Q8TAS1 419 aaKnown RBP27.6■■■□□ 2.01
RAB40C-201ENST00000248139 CCT8L2Q96SF2 557 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 PDGFDQ9GZP0 370 aaPredicted RBP27.6■■■□□ 2.01
RAB40C-201ENST00000248139 CYP26A1O43174 497 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 ATP9AO75110 1047 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 P4HBP07237 508 aaKnown RBP27.6■■■□□ 2.01
RAB40C-201ENST00000248139 TTC31Q49AM3 519 aaPredicted RBP27.6■■■□□ 2.01
RAB40C-201ENST00000248139 CBWD2Q8IUF1 395 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 EFCAB13Q8IY85 973 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 PPM1KQ8N3J5 372 aa27.6■■■□□ 2.01
RAB40C-201ENST00000248139 ZNF473Q8WTR7 871 aaKnown RBP27.6■■■□□ 2.01
RAB40C-201ENST00000248139 TCRBV7S2A1N4TA0A589 114 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 BCRP11274 1271 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 PLTPP55058 493 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 SLC20A2Q08357 652 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 TKFCQ3LXA3 575 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 SLC47A2Q86VL8 602 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 LARGE2Q8N3Y3 721 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 KCTD17Q8N5Z5 321 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 PPM1EQ8WY54 764 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 RIT2Q99578 217 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 UBE4BO95155 1302 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 SHBGP04278 402 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 TRAF1Q13077 416 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 NBPF9Q3BBW0 867 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 KRT71Q3SY84 523 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 NOP9Q86U38 636 aaKnown RBP27.59■■■□□ 2.01
RAB40C-201ENST00000248139 NLRP14Q86W24 1093 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 SLC9A9Q8IVB4 645 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 CLEC4DQ8WXI8 215 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 TAAR1Q96RJ0 339 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 TMEM117Q9H0C3 514 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 TOPORSQ9NS56 1045 aaPredicted RBP27.59■■■□□ 2.01
RAB40C-201ENST00000248139 KCND2Q9NZV8 630 aa27.59■■■□□ 2.01
RAB40C-201ENST00000248139 PTENP60484 403 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 SEMA4DQ92854 862 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 FEM1BQ9UK73 627 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 SMIM23A6NLE4 172 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 ANKRD63C9JTQ0 380 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 MAGOHP61326 146 aaKnown RBP27.58■■■□□ 2.01
RAB40C-201ENST00000248139 SF3A3Q12874 501 aaKnown RBP eCLIP27.58■■■□□ 2.01
RAB40C-201ENST00000248139 NSMFQ6X4W1 530 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 INTS8Q75QN2 995 aaKnown RBP27.58■■■□□ 2.01
RAB40C-201ENST00000248139 XXYLT1Q8NBI6 393 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 FLAD1Q8NFF5 587 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 MYCBPAPQ8TBZ2 947 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 KAT2BQ92831 832 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 MAGOHBQ96A72 148 aaKnown RBP27.58■■■□□ 2.01
RAB40C-201ENST00000248139 FMO2Q99518 471 aa27.58■■■□□ 2.01
RAB40C-201ENST00000248139 A0A087WUV0 522 aaPredicted RBP27.57■■■□□ 2
RAB40C-201ENST00000248139 CCDC172P0C7W6 258 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 VCAM1P19320 739 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 YWHABP31946 246 aaKnown RBP27.57■■■□□ 2
RAB40C-201ENST00000248139 SPDYE2Q495Y8 402 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 EPC2Q52LR7 807 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 FAM102BQ5T8I3 360 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 LRIG3Q6UXM1 1119 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 KREMEN1Q96MU8 473 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 ACCSQ96QU6 501 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 CARD9Q9H257 536 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 AGO4Q9HCK5 861 aaKnown RBP27.57■■■□□ 2
RAB40C-201ENST00000248139 MMEP08473 750 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 CHRNB2P17787 502 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 COMTP21964 271 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 PTGER2P43116 358 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 HSD17B4P51659 736 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 MTMR1Q13613 665 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 FAM160B2Q86V87 743 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 DAAM1Q9Y4D1 1078 aa27.57■■■□□ 2
RAB40C-201ENST00000248139 SORBS3O60504 671 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 PLS3P13797 630 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 QARSP47897 775 aaKnown RBP27.56■■■□□ 2
RAB40C-201ENST00000248139 PHLDB2Q86SQ0 1253 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 MDM1Q8TC05 714 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 CCDC169A6NNP5 214 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 ICAM1P05362 532 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 FBXW10Q5XX13 1052 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 FBXO25Q8TCJ0 367 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 DHX38Q92620 1227 aaKnown RBP27.56■■■□□ 2
RAB40C-201ENST00000248139 ERP44Q9BS26 406 aa27.56■■■□□ 2
RAB40C-201ENST00000248139 MXI1P50539 228 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 IFFO1Q0D2I5 559 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 JAMLQ86YT9 394 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 EIF1ADQ8N9N8 165 aaKnown RBP27.55■■■□□ 2
RAB40C-201ENST00000248139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.55■■■□□ 27e-7■■■■■ 86.8
RAB40C-201ENST00000248139 SEC14L1Q92503 715 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 GMLQ99445 158 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 SYNPO2Q9UMS6 1093 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 TELO2Q9Y4R8 837 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms