RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 STC2O76061 302 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 APOL3O95236 402 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 PTX3P26022 381 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 ADCY2Q08462 1091 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 SERINC3Q13530 473 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 MYBPC3Q14896 1274 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 EPHA7Q15375 998 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 MAN2A1Q16706 1144 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 FAM214AQ32MH5 1076 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 HECTD2Q5U5R9 776 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 NAIF1Q69YI7 327 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 TIGD7Q6NT04 549 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 ZCCHC8Q6NZY4 707 aaKnown RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 APBB1IPQ7Z5R6 666 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 C16orf92Q96LL3 132 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 HAPLN2Q9GZV7 340 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 CYP4F11Q9HBI6 524 aa4.51□□□□□ -1.69
SCN1A-208ENST00000625916 NCOA5Q9HCD5 579 aaKnown RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 EIF2B4Q9UI10 523 aaKnown RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 TNPO3Q9Y5L0 923 aaKnown RBP4.51□□□□□ -1.69
SCN1A-208ENST00000625916 GRID2IPA4D2P6 1211 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 ZAR1LA6NP61 321 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 TRIM24O15164 1050 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 MTSS1O43312 755 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 FSBPO95073 299 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 GYPEP15421 78 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 LAG3P18627 525 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 FBLP22087 321 aaKnown RBP4.5□□□□□ -1.69
SCN1A-208ENST00000625916 IGFALSP35858 605 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 ADCY1Q08828 1119 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 PLEKHG4Q58EX7 1191 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 STRIP1Q5VSL9 837 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 C7orf31Q8N865 590 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 CPPED1Q9BRF8 314 aaPredicted RBP4.5□□□□□ -1.69
SCN1A-208ENST00000625916 MTG2Q9H4K7 406 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 PTCH2Q9Y6C5 1203 aa4.5□□□□□ -1.69
SCN1A-208ENST00000625916 A0A0A6YYJ9 748 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 MASP2O00187 686 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 NRP1O14786 923 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 OPA1O60313 960 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 RAPGEF3O95398 923 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 SLC9A1P19634 815 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 CXorf67Q86X51 503 aaPredicted RBP4.49□□□□□ -1.69
SCN1A-208ENST00000625916 PHYKPLQ8IUZ5 450 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 ZNF764Q96H86 408 aaPredicted RBP4.49□□□□□ -1.69
SCN1A-208ENST00000625916 NOL10Q9BSC4 688 aaKnown RBP4.49□□□□□ -1.69
SCN1A-208ENST00000625916 OSBPL6Q9BZF3 934 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 PITHD1Q9GZP4 211 aaPredicted RBP4.49□□□□□ -1.69
SCN1A-208ENST00000625916 IGSF5Q9NSI5 407 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 ING3Q9NXR8 418 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 HS3ST4Q9Y661 456 aa4.49□□□□□ -1.69
SCN1A-208ENST00000625916 PLD2O14939 933 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 HOXA3O43365 443 aaPredicted RBP4.48□□□□□ -1.69
SCN1A-208ENST00000625916 PRPF6O94906 941 aaKnown RBP4.48□□□□□ -1.69
SCN1A-208ENST00000625916 ASLP04424 464 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 HNRNPA0Q13151 305 aaKnown RBP4.48□□□□□ -1.69
SCN1A-208ENST00000625916 C2orf27AQ580R0 203 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 PIK3R6Q5UE93 754 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 PRIMA1Q86XR5 153 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 ADGRG3Q86Y34 549 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 JMYQ8N9B5 988 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 BEND2Q8NDZ0 799 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 OR5M3Q8NGP4 307 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 HIST1H2AHQ96KK5 128 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 HIST1H2AJQ99878 128 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 MYL10Q9BUA6 226 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 KCNH6Q9H252 994 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 TOR3AQ9H497 397 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 ZNF768Q9H5H4 540 aaKnown RBP4.48□□□□□ -1.69
SCN1A-208ENST00000625916 HDAC5Q9UQL6 1122 aa4.48□□□□□ -1.69
SCN1A-208ENST00000625916 OPHN1O60890 802 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 DNAJC6O75061 913 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 ALDH1A2O94788 518 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 GAAP10253 952 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 USP14P54578 494 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 CSRP2Q16527 193 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 KIAA1841Q6NSI8 718 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 SYCE2Q6PIF2 218 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 OLFML1Q6UWY5 402 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 UNQ6494/PRO21346Q6UXR6 183 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 KANSL1Q7Z3B3 1105 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 FAM83AQ86UY5 434 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 GLB1L3Q8NCI6 653 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-208ENST00000625916 SUPT20HQ8NEM7 779 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 ELF4Q99607 663 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-208ENST00000625916 SLC46A2Q9BY10 475 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 POFUT1Q9H488 388 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 ADARB2Q9NS39 739 aaKnown RBP4.47□□□□□ -1.69
SCN1A-208ENST00000625916 TOMM22Q9NS69 142 aa4.47□□□□□ -1.69
SCN1A-208ENST00000625916 COL4A3Q01955 1670 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 A0A0A6YYK5 440 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-208ENST00000625916 CENPVL1A0A0U1RR11 272 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 KIAA0355O15063 1070 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 LPXNO60711 386 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 APOBEC3AP31941 199 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-208ENST00000625916 FLT3P36888 993 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 CASRP41180 1078 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 TAP1Q03518 808 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 ZNF460Q14592 562 aa4.46□□□□□ -1.7
SCN1A-208ENST00000625916 VPS72Q15906 364 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms