RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	RARRES1	P49788	294 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	VAMP7	P51809	220 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	PEX3	P56589	373 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	PDCL	Q13371	301 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	MTMR1	Q13613	665 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	TNIP1	Q15025	636 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	UGCG	Q16739	394 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.15	□□□□□ -0.47
TP53-223	ENST00000618944	RTKN2	Q8IZC4	609 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	PRPF38A	Q8NAV1	312 aa	Known RBP	12.15	□□□□□ -0.47
TP53-223	ENST00000618944	WHAMM	Q8TF30	809 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	HES6	Q96HZ4	224 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	ACP6	Q9NPH0	428 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	COG5	Q9UP83	839 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	PLAA	Q9Y263	795 aa		12.15	□□□□□ -0.47
TP53-223	ENST00000618944	UBE4B	O95155	1302 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	TMEM110-MUSTN1	A8MSY1	372 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	WNT10B	O00744	389 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	ZEB2	O60315	1214 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	TBC1D12	O60347	775 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	PLA2G6	O60733	806 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	ATP9A	O75110	1047 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	TMEM253	P0C7T8	217 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	ECHS1	P30084	290 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	QARS	P47897	775 aa	Known RBP	12.14	□□□□□ -0.47
TP53-223	ENST00000618944	CCT5	P48643	541 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	NPEPPS	P55786	919 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	CEP85L	Q5SZL2	805 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	BCAS4	Q8TDM0	211 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	RFFL	Q8WZ73	363 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	ACCS	Q96QU6	501 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	AGPAT1	Q99943	283 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	SYT11	Q9BT88	431 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	DPH5	Q9H2P9	285 aa		12.14	□□□□□ -0.47
TP53-223	ENST00000618944	COL2A1	P02458	1487 aa	Predicted RBP	12.14	□□□□□ -0.47
TP53-223	ENST00000618944	BACH1	O14867	736 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	FTL	P02792	175 aa	Predicted RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	PLS3	P13797	630 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	DPEP1	P16444	411 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	YWHAB	P31946	246 aa	Known RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	RASA3	Q14644	834 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	FAM102B	Q5T8I3	360 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	DCAF12L1	Q5VU92	463 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	PLA2G4F	Q68DD2	849 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	AADACL2	Q6P093	401 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	HAUS6	Q7Z4H7	955 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	SLC9A9	Q8IVB4	645 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	RASGEF1C	Q8N431	466 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	PLEKHO2	Q8TD55	490 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	KIFC3	Q9BVG8	833 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	TMEM206	Q9H813	350 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	HSPBP1	Q9NZL4	362 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	TMOD4	Q9NZQ9	345 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	DDX3Y	O15523	660 aa	Known RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	CCDC172	P0C7W6	258 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	BCR	P11274	1271 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	HSD17B3	P37058	310 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	PPAT	Q06203	517 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	RPUSD2	Q8IZ73	545 aa	Known RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	CCDC127	Q96BQ5	260 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	RNPC3	Q96LT9	517 aa	Known RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	POP1	Q99575	1024 aa	Known RBP	12.13	□□□□□ -0.47
TP53-223	ENST00000618944	STK32B	Q9NY57	414 aa		12.13	□□□□□ -0.47
TP53-223	ENST00000618944	CCDC169	A6NNP5	214 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	SGPL1	O95470	568 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	EGFR	P00533	1210 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	SOX10	P56693	466 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	RPS6	P62753	249 aa	Known RBP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	CXCL9	Q07325	125 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	C1orf220	Q5T0J3	134 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	INTS8	Q75QN2	995 aa	Known RBP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	MREG	Q8N565	214 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	XXYLT1	Q8NBI6	393 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	SAAL1	Q96ER3	474 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	CALR3	Q96L12	384 aa	Known RBP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	TRIM51	Q9BSJ1	452 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	PGAP2	Q9UHJ9	254 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	ZNRF3	Q9ULT6	936 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	UBIAD1	Q9Y5Z9	338 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	TESPA1	A2RU30	521 aa	Predicted RBP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	ANKRD62	A6NC57	917 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	PHF20L1	A8MW92	1017 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	EIF3H	O15372	352 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	HSPA9	P38646	679 aa	Known RBP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	GUCY1A3	Q02108	690 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	MAP2K1	Q02750	393 aa	Predicted RBP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	CETN1	Q12798	172 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	KIF22	Q14807	665 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	UAP1	Q16222	522 aa	Predicted RBP	12.12	□□□□□ -0.47
TP53-223	ENST00000618944	XKR9	Q5GH70	373 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	NSMF	Q6X4W1	530 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	FAM83A	Q86UY5	434 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	MCF2L2	Q86YR7	1114 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	NIM1K	Q8IY84	436 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	CCDC26	Q8TAB7	109 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	NEK9	Q8TD19	979 aa		12.12	□□□□□ -0.47
TP53-223	ENST00000618944	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms