RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 FOXN3O00409 490 aaPredicted RBP18.67■□□□□ 0.58
NEK3-206ENST00000611833 P4HBP07237 508 aaKnown RBP18.67■□□□□ 0.58
NEK3-206ENST00000611833 ECHS1P30084 290 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 PDCLQ13371 301 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 MYBPC2Q14324 1141 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 TMEM206Q9H813 350 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 EMSYQ7Z589 1322 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 TISP43B9A030 160 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 ANKRD65E5RJM6 399 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 EBAG9O00559 213 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 FGGP02679 453 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 KCNA3P22001 575 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 RFX1P22670 979 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 PRPF4BQ13523 1007 aaKnown RBP18.66■□□□□ 0.58
NEK3-206ENST00000611833 DGKZQ13574 1117 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 INTS8Q75QN2 995 aaKnown RBP18.66■□□□□ 0.58
NEK3-206ENST00000611833 CPXCR1Q8N123 301 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 PRPF38AQ8NAV1 312 aaKnown RBP18.66■□□□□ 0.58
NEK3-206ENST00000611833 AGBL3Q8NEM8 1001 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 ZBED3Q96IU2 234 aaPredicted RBP18.66■□□□□ 0.58
NEK3-206ENST00000611833 ATP6V1G3Q96LB4 118 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 THAP2Q9H0W7 228 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 UBE2TQ9NPD8 197 aaPredicted RBP18.66■□□□□ 0.58
NEK3-206ENST00000611833 ZNRF3Q9ULT6 936 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 IGSF9BQ9UPX0 1349 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 PHF20L1A8MW92 1017 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 HSD17B3P37058 310 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 DLG4P78352 724 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 MRPS9P82933 396 aaKnown RBP18.66■□□□□ 0.58
NEK3-206ENST00000611833 TKFCQ3LXA3 575 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 KDM7AQ6ZMT4 941 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 LMO3Q8TAP4 145 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 ARHGEF26Q96DR7 871 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 ACCSQ96QU6 501 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 AGPAT1Q99943 283 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 CENPHQ9H3R5 247 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 AGO4Q9HCK5 861 aaKnown RBP18.66■□□□□ 0.58
NEK3-206ENST00000611833 TAS2R14Q9NYV8 317 aa18.66■□□□□ 0.58
NEK3-206ENST00000611833 ANKRD62A6NC57 917 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 TULP1O00294 542 aaPredicted RBP18.65■□□□□ 0.58
NEK3-206ENST00000611833 TTI1O43156 1089 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 DAPK3O43293 454 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 NR1D1P20393 614 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 RARRES1P49788 294 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 VAMP7P51809 220 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 PPATQ06203 517 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 KIF22Q14807 665 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 CAMKK2Q96RR4 588 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 BCS1LQ9Y276 419 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 DIS3Q9Y2L1 958 aaKnown RBP18.65■□□□□ 0.58
NEK3-206ENST00000611833 UTP11Q9Y3A2 253 aaKnown RBP18.65■□□□□ 0.58
NEK3-206ENST00000611833 UBIAD1Q9Y5Z9 338 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 HMGB1P1B2RPK0 211 aaPredicted RBP18.65■□□□□ 0.58
NEK3-206ENST00000611833 ZEB2O60315 1214 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 ALAS1P13196 640 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 DPEP1P16444 411 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 RXRBP28702 533 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 CORO7P57737 925 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 SPP2Q13103 211 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 ALCAMQ13740 583 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 LRIG3Q6UXM1 1119 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 NIPA1Q7RTP0 329 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 RNPC3Q96LT9 517 aaKnown RBP18.65■□□□□ 0.58
NEK3-206ENST00000611833 SH2D3AQ9BRG2 576 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 NEUROG2Q9H2A3 272 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
NEK3-206ENST00000611833 TTC7AQ9ULT0 858 aaPredicted RBP18.65■□□□□ 0.58
NEK3-206ENST00000611833 DDX3YO15523 660 aaKnown RBP18.64■□□□□ 0.57
NEK3-206ENST00000611833 CTNNA1P35221 906 aaKnown RBP18.64■□□□□ 0.57
NEK3-206ENST00000611833 CXCL9Q07325 125 aa18.64■□□□□ 0.57
NEK3-206ENST00000611833 KCTD19Q17RG1 926 aaPredicted RBP18.64■□□□□ 0.57
NEK3-206ENST00000611833 NAA35Q5VZE5 725 aa18.64■□□□□ 0.57
NEK3-206ENST00000611833 PCNX4Q63HM2 1172 aa18.64■□□□□ 0.57
NEK3-206ENST00000611833 PALB2Q86YC2 1186 aa18.64■□□□□ 0.57
NEK3-206ENST00000611833 NIM1KQ8IY84 436 aa18.64■□□□□ 0.57
NEK3-206ENST00000611833 C1orf131Q8NDD1 294 aaKnown RBP18.64■□□□□ 0.57
NEK3-206ENST00000611833 CELF4Q9BZC1 486 aaKnown RBP18.64■□□□□ 0.57
NEK3-206ENST00000611833 RAVER2Q9HCJ3 691 aaKnown RBP18.64■□□□□ 0.57
NEK3-206ENST00000611833 WDR46O15213 610 aaKnown RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 MYZAPP0CAP1 466 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 MAPTP10636 758 aaKnown RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 PLS3P13797 630 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 GCLMP48507 274 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 GHRHRQ02643 423 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 MTMR1Q13613 665 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 MCF2L2Q86YR7 1114 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 SYTL5Q8TDW5 730 aaPredicted RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 UBLCP1Q8WVY7 318 aaPredicted RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 NAP1L3Q99457 506 aaPredicted RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 CBWD1Q9BRT8 395 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 FAM107BQ9H098 131 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 DBR1Q9UK59 544 aaKnown RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 FER1L6Q2WGJ9 1857 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 TMEM150BA6NC51 233 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 BHMG1C9JSJ3 638 aaPredicted RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 QARSP47897 775 aaKnown RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 PPP3CAQ08209 521 aa18.63■□□□□ 0.57
NEK3-206ENST00000611833 TRMT1LQ7Z2T5 733 aaKnown RBP18.63■□□□□ 0.57
NEK3-206ENST00000611833 XXYLT1Q8NBI6 393 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms