RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 COBLL1Q53SF7 1204 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 KAZNQ674X7 775 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.23
USP43-202ENST00000570475 FAM20AQ96MK3 541 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 KIFC3Q9BVG8 833 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 APEX2Q9UBZ4 518 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 PITPNM2Q9BZ72 1349 aa16.52■□□□□ 0.23
USP43-202ENST00000570475 ALAS1P13196 640 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 ADCY8P40145 1251 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 NUGGCQ68CJ6 796 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 KCNV1Q6PIU1 500 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 ATG4AQ8WYN0 398 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 XPO6Q96QU8 1125 aaKnown RBP16.51■□□□□ 0.23
USP43-202ENST00000570475 AGPAT1Q99943 283 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 CBWD1Q9BRT8 395 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 GPRC5CQ9NQ84 441 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 LARSQ9P2J5 1176 aaKnown RBP16.51■□□□□ 0.23
USP43-202ENST00000570475 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 ROBO3Q96MS0 1386 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 STRCP1A6NGW2 1772 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 CLDN3O15551 220 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 TGFB1I1O43294 461 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 ARP10275 920 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 AGPAT3Q9NRZ7 376 aa16.51■□□□□ 0.23
USP43-202ENST00000570475 PDE6BP35913 854 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 APOBEC3HQ6NTF7 200 aaKnown RBP16.5■□□□□ 0.23
USP43-202ENST00000570475 PADI6Q6TGC4 694 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 BARGINQ6ZT62 677 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 LRRC34Q8IZ02 419 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 LRRC57Q8N9N7 239 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 CCDC63Q8NA47 563 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 GAP43P17677 238 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 MXI1P50539 228 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 GABPAQ06546 454 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 SGO2Q562F6 1265 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 DAB2IPQ5VWQ8 1189 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 FAM47EQ6ZV65 393 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 NACC1Q96RE7 527 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 ODF2LQ9ULJ1 636 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 SGPL1O95470 568 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 PASD1Q8IV76 773 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 KIF2BQ8N4N8 673 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 NUP85Q9BW27 656 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 USP20Q9Y2K6 914 aa16.5■□□□□ 0.23
USP43-202ENST00000570475 TESPA1A2RU30 521 aaPredicted RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 XKR9Q5GH70 373 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 N4BP2L2Q92802 583 aaPredicted RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 CALR3Q96L12 384 aaKnown RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 PI4K2AQ9BTU6 479 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 IPO5O00410 1097 aaKnown RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 SLITRK3O94933 977 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 EIF2AK2P19525 551 aaKnown RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 PHLDB3Q6NSJ2 640 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 TMEM179Q6ZVK1 233 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 ZNF572Q7Z3I7 529 aaPredicted RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 ETNPPLQ8TBG4 499 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 DCAF4Q8WV16 495 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 TEKT3Q9BXF9 490 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 TCRBV7S2A1N4TA0A589 114 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 THAP12O43422 761 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 NT5C2P49902 561 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 CLNS1AP54105 237 aaKnown RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 BFSP1Q12934 665 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 LRIG3Q6UXM1 1119 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 ZSWIM2Q8NEG5 633 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 PWWP2AQ96N64 755 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 NSRP1Q9H0G5 558 aaKnown RBP16.49■□□□□ 0.23
USP43-202ENST00000570475 ARHGEF10LQ9HCE6 1279 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 KLHL11Q9NVR0 708 aa16.49■□□□□ 0.23
USP43-202ENST00000570475 GAKO14976 1311 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 ANKRD62A6NC57 917 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 CHUKO15111 745 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 TNFRSF8P28908 595 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 CLK2P49760 499 aaKnown RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 VAMP7P51809 220 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 GPC5P78333 572 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 DDR1Q08345 913 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 SPRED3Q2MJR0 410 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 PARP9Q8IXQ6 854 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 TRAPPC3O43617 180 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 RAD17O75943 681 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 TMEM253P0C7T8 217 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 UBAP2Q5T6F2 1119 aaKnown RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 DHX38Q92620 1227 aaKnown RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 DNM1LO00429 736 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 IFNB1P01574 187 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 STX2P32856 288 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 RPL21P46778 160 aaKnown RBP16.48■□□□□ 0.23
USP43-202ENST00000570475 PRELPP51888 382 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 CYB5D1Q6P9G0 228 aa16.48■□□□□ 0.23
USP43-202ENST00000570475 ZNF365Q70YC5 407 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms