RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	NT5DC1	Q5TFE4	455 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	KSR1	Q8IVT5	923 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	C7orf61	Q8IZ16	206 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	SPATA20	Q8TB22	786 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	OSMR	Q99650	979 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	ADAMTS10	Q9H324	1103 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	ARHGAP28	Q9P2N2	729 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	GINS2	Q9Y248	185 aa		13.24	□□□□□ -0.29
FANCA-231	ENST00000568626	LTBP2	Q14767	1821 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	SFI1	A8K8P3	1242 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	RHOBTB3	O94955	611 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	CHRNA1	P02708	482 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	IQCF3	P0C7M6	154 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	DARS	P14868	501 aa	Known RBP	13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	CAMK4	Q16566	473 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	KMT5B	Q4FZB7	885 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	TRAF7	Q6Q0C0	670 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	TRIML1	Q8N9V2	468 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	DPF3	Q92784	378 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	PRIMPOL	Q96LW4	560 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	PPP1R12C	Q9BZL4	782 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	TMEM134	Q9H6X4	195 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	MRPL44	Q9H9J2	332 aa	Known RBP	13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	IFT122	Q9HBG6	1241 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	KIAA1468	Q9P260	1216 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	PCDHA5	Q9Y5H7	936 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	NR2E3	Q9Y5X4	410 aa		13.23	□□□□□ -0.29
FANCA-231	ENST00000568626	ADGRA3	Q8IWK6	1321 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	RPS6KA5	O75582	802 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	KIF20A	O95235	890 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	PFKM	P08237	780 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	MBTD1	Q05BQ5	628 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	STRN3	Q13033	797 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	MAPK6	Q16659	721 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	FAM187B	Q17R55	369 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	FBXO47	Q5MNV8	452 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	MFSD5	Q6N075	450 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	PPP4R3CP	Q6ZMV5	832 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	RBM43	Q6ZSC3	357 aa	Known RBP	13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	TSHZ1	Q6ZSZ6	1077 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	HAUS6	Q7Z4H7	955 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	TMEM199	Q8N511	208 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	TMEM161B	Q8NDZ6	487 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	FIZ1	Q96SL8	496 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	PPP1R16B	Q96T49	567 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	WNT8A	Q9H1J5	351 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	POLD4	Q9HCU8	107 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	PCDHB13	Q9Y5F0	798 aa		13.22	□□□□□ -0.29
FANCA-231	ENST00000568626	UMODL1	Q5DID0	1318 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	TRIOBP	Q9H2D6	2365 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	DENND3	A2RUS2	1198 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	TRIM43B	A6NCK2	446 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	INO80B-WBP1	J3KQ70	363 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626		K7ERI5	159 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	GPR182	O15218	404 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	EIF3D	O15371	548 aa	Known RBP eCLIP	13.21	□□□□□ -0.29	4e-7	■□□□□ 9.2
FANCA-231	ENST00000568626	SLC16A4	O15374	487 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	PPP1R37	O75864	691 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	ERLIN2	O94905	339 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	GCNT3	O95395	438 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	CXCL10	P02778	98 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	CYP2C18	P33260	490 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	PPP1R2	P41236	205 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	SARS	P49591	514 aa	Known RBP	13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	GTF2B	Q00403	316 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	NCBP1	Q09161	790 aa	Known RBP	13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	PAK2	Q13177	524 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	LPIN1	Q14693	890 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	CAVIN1	Q6NZI2	390 aa	Known RBP	13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	ZNF720	Q7Z2F6	126 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	TMEM40	Q8WWA1	233 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	APBB2	Q92870	758 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	KIFC3	Q9BVG8	833 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	CCDC113	Q9H0I3	377 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	FZD8	Q9H461	694 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	EXOC7	Q9UPT5	735 aa		13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	COLQ	Q9Y215	455 aa	Predicted RBP	13.21	□□□□□ -0.29
FANCA-231	ENST00000568626	CNTNAP2	Q9UHC6	1331 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626		H0YGN5	161 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	ACKR2	O00590	384 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	LETM1	O95202	739 aa	Predicted RBP	13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	PRKCB	P05771	671 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	GHR	P10912	638 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	NMT1	P30419	496 aa	Known RBP	13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	AXL	P30530	894 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	CCL23	P55773	120 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	MBTPS1	Q14703	1052 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	BMT2	Q1RMZ1	405 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	COBLL1	Q53SF7	1204 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	CATSPER4	Q7RTX7	472 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	FAM228A	Q86W67	206 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	MAP4K3	Q8IVH8	894 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	SEPT8	Q92599	483 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	CCDC51	Q96ER9	411 aa		13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	ZNF668	Q96K58	619 aa	Predicted RBP	13.2	□□□□□ -0.3
FANCA-231	ENST00000568626	STRA6	Q9BX79	667 aa		13.2	□□□□□ -0.3

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