RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CBWD5Q5RIA9 395 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 STXBP4Q6ZWJ1 553 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 ZNF513Q8N8E2 541 aaPredicted RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 MRRFQ96E11 262 aaKnown RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 PARVGQ9HBI0 331 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 BTNL10A8MVZ5 291 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 SPATA31C1P0DKV0 1188 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 GCLMP48507 274 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 ICA1Q05084 483 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 AP1ARQ63HQ0 302 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 NUGGCQ68CJ6 796 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 CCDC174Q6PII3 467 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 PPM1KQ8N3J5 372 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 RNF25Q96BH1 459 aaPredicted RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 TMX4Q9H1E5 349 aaPredicted RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 KCNMB3Q9NPA1 279 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 MSH4O15457 936 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 BCRP11274 1271 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 SLC8A1P32418 973 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 SHMT1P34896 483 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 DDR1Q08345 913 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 MAPK7Q13164 816 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 ZYXQ15942 572 aaKnown RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 C6orf118Q5T5N4 469 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 RPUSD2Q8IZ73 545 aaKnown RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 KIF2BQ8N4N8 673 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 C1orf131Q8NDD1 294 aaKnown RBP12.74□□□□□ -0.37
ABCA3-203ENST00000563623 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 EIF4E1BA6NMX2 242 aaKnown RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 FOXO6A8MYZ6 492 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 GAS7O60861 476 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 RPL21P46778 160 aaKnown RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 ERMARDQ5T6L9 678 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 C1orf54Q8WWF1 131 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 NOD2Q9HC29 1040 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 MYH7BA7E2Y1 1941 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 COMTP21964 271 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 CLK2P49760 499 aaKnown RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 HYIQ5T013 277 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 DCAF12L1Q5VU92 463 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 PRR5LQ6MZQ0 368 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 RASGEF1CQ8N431 466 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 CCDC127Q96BQ5 260 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 CARD9Q9H257 536 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 ACP6Q9NPH0 428 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 FGFR1OP2Q9NVK5 253 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 L3MBTL1Q9Y468 752 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 ANKRD62A6NC57 917 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 GOLGA8IPA6NC78 632 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 FAM187AA6NFU0 413 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 K7ENM7 598 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 PPFIA2O75334 1257 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 EYA4O95677 639 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 PREPLQ4J6C6 727 aaPredicted RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 RSRC1Q96IZ7 334 aaKnown RBP12.73□□□□□ -0.37
ABCA3-203ENST00000563623 AGPAT1Q99943 283 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 HOMER3Q9NSC5 361 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
ABCA3-203ENST00000563623 ROBO1Q9Y6N7 1651 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 A0A0A6YYK5 440 aaPredicted RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 A0A1B0GUA9 196 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 GAP43P17677 238 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 ADCY2Q08462 1091 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 DUPD1Q68J44 220 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 FOXR2Q6PJQ5 311 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 ATP8B4Q8TF62 1192 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 POP1Q99575 1024 aaKnown RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 GGA2Q9UJY4 613 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 F5H6K3 240 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 MEIS2O14770 477 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 KIAA0391O15091 583 aaKnown RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 SLC16A3O15427 465 aaKnown RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 DDX3YO15523 660 aaKnown RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 SERPINB2P05120 415 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 DLATP10515 647 aaKnown RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 PAX7P23759 505 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 POLD1P28340 1107 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 GCKP35557 465 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 240.4 ms