RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 NIPA1Q7RTP0 329 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 DDX42Q86XP3 938 aaKnown RBP eCLIP24.5■■□□□ 1.51
RCCD1-208ENST00000557266 DBR1Q9UK59 544 aaKnown RBP24.5■■□□□ 1.51
RCCD1-208ENST00000557266 BCS1LQ9Y276 419 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 MYH11P35749 1972 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 FAM170AA1A519 330 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 KRT13P13646 458 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 RFX1P22670 979 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 GNGT1P63211 74 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 SPP2Q13103 211 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 MTMR14Q8NCE2 650 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 CBWD1Q9BRT8 395 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 THAP2Q9H0W7 228 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 UBIAD1Q9Y5Z9 338 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 EMSYQ7Z589 1322 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 LOXHD1Q8IVV2 1947 aa24.5■■□□□ 1.51
RCCD1-208ENST00000557266 EIF3HO15372 352 aaKnown RBP eCLIP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 DDX3YO15523 660 aaKnown RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 MAPTP10636 758 aaKnown RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 TNFAIP3P21580 790 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 MRPS9P82933 396 aaKnown RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 MAP3K10Q02779 954 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 PPP3CAQ08209 521 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 INTS8Q75QN2 995 aaKnown RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 TMEM174Q8WUU8 243 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 TMEM206Q9H813 350 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 FEZ2Q9UHY8 353 aaPredicted RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 TRIM66O15016 1216 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 KCTD19Q17RG1 926 aaPredicted RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 DCAF12L1Q5VU92 463 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 NEUROG2Q9H2A3 272 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 SLITRK6Q9H5Y7 841 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 SEPT11Q9NVA2 429 aaKnown RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 AMACRQ9UHK6 382 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 TTC7AQ9ULT0 858 aaPredicted RBP24.49■■□□□ 1.51
RCCD1-208ENST00000557266 CD2APQ9Y5K6 639 aa24.49■■□□□ 1.51
RCCD1-208ENST00000557266 PLS3P13797 630 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 VAMP7P51809 220 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 GHRHRQ02643 423 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 ALCAMQ13740 583 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 TNIP1Q15025 636 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 C1orf220Q5T0J3 134 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 TTC19Q6DKK2 380 aaPredicted RBP24.48■■□□□ 1.51
RCCD1-208ENST00000557266 ARHGEF19Q8IW93 802 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 C12orf56Q8IXR9 622 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 PRPF38AQ8NAV1 312 aaKnown RBP24.48■■□□□ 1.51
RCCD1-208ENST00000557266 SLC20A1Q8WUM9 679 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 ACCSQ96QU6 501 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 COG5Q9UP83 839 aa24.48■■□□□ 1.51
RCCD1-208ENST00000557266 QARSP47897 775 aaKnown RBP24.47■■□□□ 1.51
RCCD1-208ENST00000557266 PCNX4Q63HM2 1172 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 ZSWIM2Q8NEG5 633 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 AGPAT1Q99943 283 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 SH2D3AQ9BRG2 576 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 UBE2TQ9NPD8 197 aaPredicted RBP24.47■■□□□ 1.51
RCCD1-208ENST00000557266 PLAAQ9Y263 795 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 SAMM50Q9Y512 469 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 ANKRD62A6NC57 917 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 EPC2Q52LR7 807 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 MCF2L2Q86YR7 1114 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 PLEKHO2Q8TD55 490 aa24.47■■□□□ 1.51
RCCD1-208ENST00000557266 SCAF8Q9UPN6 1271 aaKnown RBP24.47■■□□□ 1.51
RCCD1-208ENST00000557266 FER1L6Q2WGJ9 1857 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 TMEM150BA6NC51 233 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 PHF20L1A8MW92 1017 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 LYPLA2O95372 231 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 FGGP02679 453 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 GCLMP48507 274 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 MTMR1Q13613 665 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 NBPF9Q3BBW0 867 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 CPXCR1Q8N123 301 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 SYTL5Q8TDW5 730 aaPredicted RBP24.46■■□□□ 1.51
RCCD1-208ENST00000557266 ZBED3Q96IU2 234 aaPredicted RBP24.46■■□□□ 1.51
RCCD1-208ENST00000557266 HSPBP1Q9NZL4 362 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 PPP1R1BQ9UD71 204 aaPredicted RBP24.46■■□□□ 1.51
RCCD1-208ENST00000557266 TTI1O43156 1089 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 ALAS1P13196 640 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 HSD17B3P37058 310 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 POU5F1Q01860 360 aaKnown RBP24.46■■□□□ 1.51
RCCD1-208ENST00000557266 UAP1Q16222 522 aaPredicted RBP24.46■■□□□ 1.51
RCCD1-208ENST00000557266 UGCGQ16739 394 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 DALRD3Q5D0E6 543 aaKnown RBP24.46■■□□□ 1.51
RCCD1-208ENST00000557266 C1orf131Q8NDD1 294 aaKnown RBP24.46■■□□□ 1.51
RCCD1-208ENST00000557266 HOMER2Q9NSB8 354 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 NR2E1Q9Y466 385 aa24.46■■□□□ 1.51
RCCD1-208ENST00000557266 WNT10BO00744 389 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 P4HA2O15460 535 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 YWHABP31946 246 aaKnown RBP24.45■■□□□ 1.5
RCCD1-208ENST00000557266 PDCLQ13371 301 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 DGKZQ13574 1117 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 SKIDA1Q1XH10 827 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 KDM7AQ6ZMT4 941 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 XXYLT1Q8NBI6 393 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 AGBL3Q8NEM8 1001 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 SEC14L1Q92503 715 aa24.45■■□□□ 1.5
RCCD1-208ENST00000557266 CELF4Q9BZC1 486 aaKnown RBP24.45■■□□□ 1.5
RCCD1-208ENST00000557266 RAVER2Q9HCJ3 691 aaKnown RBP24.45■■□□□ 1.5
RCCD1-208ENST00000557266 ASTN2O75129 1339 aaPredicted RBP24.45■■□□□ 1.5
RCCD1-208ENST00000557266 WDR46O15213 610 aaKnown RBP24.44■■□□□ 1.5
RCCD1-208ENST00000557266 DAPK3O43293 454 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms