RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 SEC24CP53992 1094 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 PPP3CAQ08209 521 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 ARHGEF19Q8IW93 802 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 CPXCR1Q8N123 301 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 CCDC26Q8TAB7 109 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 LMO3Q8TAP4 145 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 CNKSR1Q969H4 720 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 MXRA8Q9BRK3 442 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 CCPG1Q9ULG6 757 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 NCANO14594 1321 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 DDX3YO15523 660 aaKnown RBP15.77■□□□□ 0.12
ACTN1-211ENST00000553882 KRT13P13646 458 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 PPATQ06203 517 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 ITGB3BPQ13352 177 aaPredicted RBP15.77■□□□□ 0.12
ACTN1-211ENST00000553882 B3GNT9Q6UX72 402 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 ALG3Q92685 438 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 KAT5Q92993 513 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 LRRC45Q96CN5 670 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 ERVK-5Q9HDB9 667 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 ACP6Q9NPH0 428 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 KCND2Q9NZV8 630 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 UTP11Q9Y3A2 253 aaKnown RBP15.77■□□□□ 0.12
ACTN1-211ENST00000553882 UBE4BO95155 1302 aa15.77■□□□□ 0.12
ACTN1-211ENST00000553882 TMEM110-MUSTN1A8MSY1 372 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 HMGB1P1B2RPK0 211 aaPredicted RBP15.77■□□□□ 0.11
ACTN1-211ENST00000553882 H0YGN5 161 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 LIG3P49916 1009 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 ZNF844Q08AG5 666 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 FAM151AQ8WW52 585 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 GLG1Q92896 1179 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 SLITRK6Q9H5Y7 841 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 TMBIM4Q9HC24 238 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 GPRC5CQ9NQ84 441 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.11
ACTN1-211ENST00000553882 NFS1Q9Y697 457 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 ZHX2Q9Y6X8 837 aa15.77■□□□□ 0.11
ACTN1-211ENST00000553882 CNTNAP1P78357 1384 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 VGLL3A8MV65 326 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 DHX9Q08211 1270 aaKnown RBP15.76■□□□□ 0.11
ACTN1-211ENST00000553882 SLC20A2Q08357 652 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 DGKZQ13574 1117 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 PACS2Q86VP3 889 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 OGFOD1Q8N543 542 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 FLAD1Q8NFF5 587 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 SYNPO2Q9UMS6 1093 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 GOLGA8IPA6NC78 632 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 GOLGA8JA6NMD2 632 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 PLSCR1O15162 318 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 ATMINO43313 823 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-211ENST00000553882 FTLP02792 175 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-211ENST00000553882 CCDC172P0C7W6 258 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 INPP5BP32019 993 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 VAMP7P51809 220 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.76■□□□□ 0.11
ACTN1-211ENST00000553882 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 STRA6Q9BX79 667 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 LRRC4CQ9HCJ2 640 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 CTTNBP2NLQ9P2B4 639 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 ATP8B3O60423 1300 aa15.76■□□□□ 0.11
ACTN1-211ENST00000553882 ANKRD62A6NC57 917 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 MYO1FO00160 1098 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 BCRP11274 1271 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 MARCKSL1P49006 195 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 RSBN1LQ6PCB5 846 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-211ENST00000553882 TMC3Q7Z5M5 1100 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 EFCAB13Q8IY85 973 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 MICALL1Q8N3F8 863 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 ELMO3Q96BJ8 720 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 ATP8A1Q9Y2Q0 1164 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 MDH1P40925 334 aaKnown RBP15.75■□□□□ 0.11
ACTN1-211ENST00000553882 RARRES1P49788 294 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 KIF22Q14807 665 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 ODF2Q5BJF6 829 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 EIF1ADQ8N9N8 165 aaKnown RBP15.75■□□□□ 0.11
ACTN1-211ENST00000553882 PPM1EQ8WY54 764 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 KRT35Q92764 455 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 RIT2Q99578 217 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 PPANQ9NQ55 473 aaKnown RBP15.75■□□□□ 0.11
ACTN1-211ENST00000553882 ALG6Q9Y672 507 aa15.75■□□□□ 0.11
ACTN1-211ENST00000553882 DCDC2CA8MYV0 355 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 CLSTN1O94985 981 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 P4HBP07237 508 aaKnown RBP15.74■□□□□ 0.11
ACTN1-211ENST00000553882 MUTP22033 750 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 CAP2P40123 477 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 DR1Q01658 176 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 POU5F1Q01860 360 aaKnown RBP15.74■□□□□ 0.11
ACTN1-211ENST00000553882 SPP2Q13103 211 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 INTS8Q75QN2 995 aaKnown RBP15.74■□□□□ 0.11
ACTN1-211ENST00000553882 TADA2BQ86TJ2 420 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 FAM160B2Q86V87 743 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
ACTN1-211ENST00000553882 PLEKHO2Q8TD55 490 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 ZNF341Q9BYN7 854 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 EPN3Q9H201 632 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 HSPBP1Q9NZL4 362 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 FEM1BQ9UK73 627 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 BHMG1C9JSJ3 638 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-211ENST00000553882 SLC16A4O15374 487 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 DHX15O43143 795 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms