RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 MAATS1Q7Z4T9 603 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 SLC9A9Q8IVB4 645 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 CLEC4DQ8WXI8 215 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 RNPC3Q96LT9 517 aaKnown RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 ZNF341Q9BYN7 854 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 ICAM1P05362 532 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 P4HBP07237 508 aaKnown RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 SKOR1P84550 965 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 ZNF211Q13398 564 aaPredicted RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 PRPF4BQ13523 1007 aaKnown RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 UAP1Q16222 522 aaPredicted RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 TKFCQ3LXA3 575 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 CEP85LQ5SZL2 805 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 C1orf220Q5T0J3 134 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 PLEKHO2Q8TD55 490 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 GPRC5CQ9NQ84 441 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 LARSQ9P2J5 1176 aaKnown RBP11.84□□□□□ -0.51
LIN54-207ENST00000508171 ATP8B3O60423 1300 aa11.84□□□□□ -0.51
LIN54-207ENST00000508171 BHMG1C9JSJ3 638 aaPredicted RBP11.83□□□□□ -0.51
LIN54-207ENST00000508171 CCDC188H7C350 402 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 TBC1D12O60347 775 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 ALAS1P13196 640 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 RARRES1P49788 294 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 VAMP7P51809 220 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 GUCY1A3Q02108 690 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 CUL1Q13616 776 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 KIF22Q14807 665 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 AADACL2Q6P093 401 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 CD302Q8IX05 232 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 KAT5Q92993 513 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 AGPAT1Q99943 283 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 CENPHQ9H3R5 247 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 ACP6Q9NPH0 428 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 PGAP2Q9UHJ9 254 aa11.83□□□□□ -0.51
LIN54-207ENST00000508171 NCANO14594 1321 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 ZEB2O60315 1214 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 KRT13P13646 458 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 UGCGQ16739 394 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 ZNF746Q6NUN9 644 aaPredicted RBP11.83□□□□□ -0.52
LIN54-207ENST00000508171 TRIM31Q9BZY9 425 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 DEFB129Q9H1M3 183 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 DPH5Q9H2P9 285 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 RAVER2Q9HCJ3 691 aaKnown RBP11.83□□□□□ -0.52
LIN54-207ENST00000508171 AGO4Q9HCK5 861 aaKnown RBP11.83□□□□□ -0.52
LIN54-207ENST00000508171 RPTORQ8N122 1335 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 H0YGN5 161 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 SLC16A4O15374 487 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 ATP9AO75110 1047 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 FTLP02792 175 aaPredicted RBP11.83□□□□□ -0.52
LIN54-207ENST00000508171 ASNSP08243 561 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 BCRP11274 1271 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 USP8P40818 1118 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 HAUS6Q7Z4H7 955 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 ALG3Q92685 438 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 TAAR1Q96RJ0 339 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 TRIM51Q9BSJ1 452 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 RASSF4Q9H2L5 321 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 ERVK-5Q9HDB9 667 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 NFS1Q9Y697 457 aa11.83□□□□□ -0.52
LIN54-207ENST00000508171 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 WNT10BO00744 389 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 PLS3P13797 630 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 EIF2AK2P19525 551 aaKnown RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 YWHABP31946 246 aaKnown RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 QARSP47897 775 aaKnown RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 PEX3P56589 373 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 POU5F1Q01860 360 aaKnown RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 MTMR1Q13613 665 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 INTS8Q75QN2 995 aaKnown RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 TTLL6Q8N841 843 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 ELMO3Q96BJ8 720 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 ATP6V1G3Q96LB4 118 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 HSPBP1Q9NZL4 362 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 UBIAD1Q9Y5Z9 338 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 NR1D1P20393 614 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 KDM7AQ6ZMT4 941 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 EIF1ADQ8N9N8 165 aaKnown RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 CCDC26Q8TAB7 109 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
LIN54-207ENST00000508171 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.82□□□□□ -0.52
LIN54-207ENST00000508171 GLG1Q92896 1179 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 ACCSQ96QU6 501 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 SLITRK6Q9H5Y7 841 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 TMEM206Q9H813 350 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 LRRC4CQ9HCJ2 640 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 TMEM51Q9NW97 253 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 ALG6Q9Y672 507 aa11.82□□□□□ -0.52
LIN54-207ENST00000508171 PHF20L1A8MW92 1017 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 BACH1O14867 736 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 MYCLP12524 364 aaPredicted RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 CTNNA1P35221 906 aaKnown RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 CORO7P57737 925 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms