RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 NDUFAB1O14561 156 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 FOSP01100 380 aaPredicted RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 DNA2P51530 1060 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 CASP5P51878 434 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 ARHGAP4P98171 946 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 PDCLQ13371 301 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 POTEEQ6S8J3 1075 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 LBX2Q6XYB7 198 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 KLHL7Q8IXQ5 586 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 CPXCR1Q8N123 301 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 REPS2Q8NFH8 660 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 TPCN2Q8NHX9 752 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 LRRC45Q96CN5 670 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 RNPC3Q96LT9 517 aaKnown RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.48□□□□□ -0.254e-10■■■■□ 26
UBA3-202ENST00000361055 ASCC2Q9H1I8 757 aaPredicted RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 TMBIM4Q9HC24 238 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 RAVER2Q9HCJ3 691 aaKnown RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 TYW1Q9NV66 732 aaKnown RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 SUCLA2Q9P2R7 463 aaPredicted RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 ABT1Q9ULW3 272 aaKnown RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 STXBP5LQ9Y2K9 1186 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 SLC45A1Q9Y2W3 748 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 MRPL11Q9Y3B7 192 aaKnown RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 ATP2A1O14983 1001 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 CEP104O60308 925 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 H2AFZP0C0S5 128 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 NR1D1P20393 614 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 LSP1P33241 339 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 JAM2P57087 298 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 PSMC6P62333 389 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 TRADDQ15628 312 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
UBA3-202ENST00000361055 H2AFVQ71UI9 128 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 TEX2Q8IWB9 1127 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 SYCE1Q8N0S2 351 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 MICALL1Q8N3F8 863 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 RASGEF1CQ8N431 466 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 AGBL1Q96MI9 1066 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 GGA2Q9UJY4 613 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 PNMA3Q9UL41 463 aa13.48□□□□□ -0.25
UBA3-202ENST00000361055 RBBP6Q7Z6E9 1792 aaKnown RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 AKAP3O75969 853 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 ERLIN2O94905 339 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 SLC10A3P09131 477 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 CIITAP33076 1130 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 MDH1P40925 334 aaKnown RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 ATP1A2P50993 1020 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 ERVK-9P63128 1117 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 SFR1Q86XK3 245 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 ARFGAP2Q8N6H7 521 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 METTL13Q8N6R0 699 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 BRI3BPQ8WY22 251 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 P2RX7Q99572 595 aaKnown RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 REEP2Q9BRK0 252 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 POLR3CQ9BUI4 534 aaPredicted RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 SIX2Q9NPC8 291 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 PLAAQ9Y263 795 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 VGLL3A8MV65 326 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 SART1O43290 800 aaKnown RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 PPP1R37O75864 691 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 NR3C1P04150 777 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 FERP16591 822 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 ITGB3BPQ13352 177 aaPredicted RBP13.47□□□□□ -0.25
UBA3-202ENST00000361055 TMEM132BQ14DG7 1078 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 PRR16Q569H4 304 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 MICALCLQ6ZW33 695 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 SLITRK6Q9H5Y7 841 aa13.47□□□□□ -0.25
UBA3-202ENST00000361055 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.25
UBA3-202ENST00000361055 GOLGA6L10A6NI86 522 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 BTBD19C9JJ37 291 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 H0YGN5 161 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 OPLAHO14841 1288 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
UBA3-202ENST00000361055 GAP43P17677 238 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 ECHS1P30084 290 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 PTGISQ16647 500 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 NFIL3Q16649 462 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 CEP85LQ5SZL2 805 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 PEX26Q7Z412 305 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 MAATS1Q7Z4T9 603 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 YTHDF3Q7Z739 585 aaKnown RBP13.46□□□□□ -0.25
UBA3-202ENST00000361055 SLC35C1Q96A29 364 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 LENG9Q96B70 501 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 BORCS6Q96GS4 357 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 UIMC1Q96RL1 719 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 TEX13BQ9BXU2 312 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 TTC7AQ9ULT0 858 aaPredicted RBP13.46□□□□□ -0.25
UBA3-202ENST00000361055 NFS1Q9Y697 457 aa13.46□□□□□ -0.25
UBA3-202ENST00000361055 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.26
UBA3-202ENST00000361055 PIK3CDO00329 1044 aa13.45□□□□□ -0.26
UBA3-202ENST00000361055 PDHXO00330 501 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms