RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 GMCL1P1Q8NEA9 526 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-201ENST00000285398 ANKRD27Q96NW4 1050 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 BARHL2Q9NY43 387 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 PACSIN2Q9UNF0 486 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-201ENST00000285398 BHMG1C9JSJ3 638 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-201ENST00000285398 F8VZ95 297 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 ZNF131P52739 623 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 TRAF1Q13077 416 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 KIAA0753Q2KHM9 967 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 SFMBT2Q5VUG0 894 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 DDX42Q86XP3 938 aaKnown RBP eCLIP11.37□□□□□ -0.59
ERCC3-201ENST00000285398 MDM1Q8TC05 714 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 PARD3BQ8TEW8 1205 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 ZBTB10Q96DT7 871 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 OTUD5Q96G74 571 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 WNK4Q96J92 1243 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 UIMC1Q96RL1 719 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 EMILIN3Q9NT22 766 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 TMEM260Q9NX78 707 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 PRR12Q9ULL5 1215 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
ERCC3-201ENST00000285398 CCDC194A0A1B0GVG4 234 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 AHCYL1O43865 530 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 FESP07332 822 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 NEFHP12036 1026 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 CHN1P15882 459 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 STAT2P52630 851 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 DHX9Q08211 1270 aaKnown RBP11.36□□□□□ -0.59
ERCC3-201ENST00000285398 SLC18A3Q16572 532 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 UBE2SQ16763 222 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 FAM133BQ5BKY9 247 aaKnown RBP11.36□□□□□ -0.59
ERCC3-201ENST00000285398 CABP7Q86V35 215 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 GBP7Q8N8V2 638 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-201ENST00000285398 DCAF4Q8WV16 495 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 AK8Q96MA6 479 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 NEUROG2Q9H2A3 272 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 BIN2Q9UBW5 565 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-201ENST00000285398 ZNF112Q9UJU3 913 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 SNCAIPQ9Y6H5 919 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 SMCO2A6NFE2 343 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 PGRMC1O00264 195 aaKnown RBP11.36□□□□□ -0.59
ERCC3-201ENST00000285398 VCAM1P19320 739 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 TEX9Q8N6V9 391 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 SLITRK6Q9H5Y7 841 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 FAM114A2Q9NRY5 505 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 CEP72Q9P209 647 aa11.36□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 ZBTB5O15062 677 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 CEP104O60308 925 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP17L6PQ6QN14 398 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 CPXCR1Q8N123 301 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 ZNF280CQ8ND82 737 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 IFT74Q96LB3 600 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 LZTS2Q9BRK4 669 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 PNMA2Q9UL42 364 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 UTP11Q9Y3A2 253 aaKnown RBP11.35□□□□□ -0.59
ERCC3-201ENST00000285398 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 DAPK3O43293 454 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 KIF4AO95239 1232 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 ATP2A2P16615 1042 aaKnown RBP11.35□□□□□ -0.59
ERCC3-201ENST00000285398 FLT3P36888 993 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 MMP13P45452 471 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 USP11P51784 963 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 CCNG1P51959 295 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-201ENST00000285398 SLC30A9Q6PML9 568 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 DAGLBQ8NCG7 672 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 ELAC2Q9BQ52 826 aaKnown RBP11.35□□□□□ -0.59
ERCC3-201ENST00000285398 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■□□□ 12.4
ERCC3-201ENST00000285398 YIPF3Q9GZM5 350 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
ERCC3-201ENST00000285398 PNMA6FA0A0J9YX94 578 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 BTNL10A8MVZ5 291 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 KRIT1O00522 736 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 FLOT1O75955 427 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 ALDH5A1P51649 535 aaPredicted RBP11.34□□□□□ -0.59
ERCC3-201ENST00000285398 BACE1P56817 501 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 ATP11AP98196 1134 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 INF2Q27J81 1249 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 ANKRD20A2Q5SQ80 823 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 C10orf76Q5T2E6 689 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 ANKRD20A1Q5TYW2 823 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 ANKRD20A3Q5VUR7 823 aa11.34□□□□□ -0.59
ERCC3-201ENST00000285398 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms