RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 COL4A3BPQ9Y5P4 624 aa21.19■□□□□ 0.98
CLN6-213ENST00000636212 A0A0U1RQF3 1178 aa21.18■□□□□ 0.98
CLN6-213ENST00000636212 TXKP42681 527 aa21.18■□□□□ 0.98
CLN6-213ENST00000636212 GUCY1B3Q02153 619 aa21.18■□□□□ 0.98
CLN6-213ENST00000636212 CTTNQ14247 550 aaKnown RBP21.18■□□□□ 0.98
CLN6-213ENST00000636212 TWF2Q6IBS0 349 aaKnown RBP21.18■□□□□ 0.98
CLN6-213ENST00000636212 COLGALT1Q8NBJ5 622 aa21.18■□□□□ 0.98
CLN6-213ENST00000636212 EIF2AK1Q9BQI3 630 aaKnown RBP21.18■□□□□ 0.98
CLN6-213ENST00000636212 UPF2Q9HAU5 1272 aaKnown RBP21.18■□□□□ 0.98
CLN6-213ENST00000636212 PIN4Q9Y237 131 aaKnown RBP21.18■□□□□ 0.98
CLN6-213ENST00000636212 H3BQ06 376 aaPredicted RBP21.17■□□□□ 0.98
CLN6-213ENST00000636212 ASAP2O43150 1006 aa21.17■□□□□ 0.98
CLN6-213ENST00000636212 CSDE1O75534 798 aaKnown RBP21.17■□□□□ 0.98
CLN6-213ENST00000636212 ATP2B1P20020 1258 aa21.17■□□□□ 0.98
CLN6-213ENST00000636212 SPIRE1Q08AE8 756 aa21.17■□□□□ 0.98
CLN6-213ENST00000636212 HYAL1Q12794 435 aa21.17■□□□□ 0.98
CLN6-213ENST00000636212 C8orf34Q49A92 452 aa21.17■□□□□ 0.98
CLN6-213ENST00000636212 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.17■□□□□ 0.98
CLN6-213ENST00000636212 RSPH1Q8WYR4 309 aa21.17■□□□□ 0.98
CLN6-213ENST00000636212 MRPL9Q9BYD2 267 aaKnown RBP21.17■□□□□ 0.98
CLN6-213ENST00000636212 DHX33Q9H6R0 707 aaKnown RBP21.17■□□□□ 0.98
CLN6-213ENST00000636212 WRAP73Q9P2S5 460 aaPredicted RBP21.17■□□□□ 0.98
CLN6-213ENST00000636212 PUF60Q9UHX1 559 aaKnown RBP21.17■□□□□ 0.98
CLN6-213ENST00000636212 KIAA1671Q9BY89 1806 aa21.17■□□□□ 0.98
CLN6-213ENST00000636212 REV3LO60673 3130 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 FNDC1Q4ZHG4 1894 aaPredicted RBP21.16■□□□□ 0.98
CLN6-213ENST00000636212 FGF18O76093 207 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 PPM1AP35813 382 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 RAB27AP51159 221 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 ST3GAL1Q11201 340 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 EMC2Q15006 297 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 SRGAP1Q7Z6B7 1085 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 CASD1Q96PB1 797 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 MTRQ99707 1265 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 TLR9Q9NR96 1032 aa21.16■□□□□ 0.98
CLN6-213ENST00000636212 FSD2A1L4K1 749 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 SLITRK3O94933 977 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 SRGAP2CP0DJJ0 459 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 MCM7P33993 719 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 KRT17Q04695 432 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 COL19A1Q14993 1142 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 PDE12Q6L8Q7 609 aaKnown RBP21.15■□□□□ 0.98
CLN6-213ENST00000636212 KSR1Q8IVT5 923 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 PRPF31Q8WWY3 499 aaKnown RBP21.15■□□□□ 0.98
CLN6-213ENST00000636212 TMEM143Q96AN5 459 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 ZNF558Q96NG5 402 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 FOXP1Q9H334 677 aaPredicted RBP21.15■□□□□ 0.98
CLN6-213ENST00000636212 CWH43Q9H720 699 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 BMP2KQ9NSY1 1161 aaPredicted RBP21.15■□□□□ 0.98
CLN6-213ENST00000636212 ANKEF1Q9NU02 776 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 VCANP13611 3396 aa21.15■□□□□ 0.98
CLN6-213ENST00000636212 CARNS1A5YM72 827 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 GRXCR2A6NFK2 248 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 ST18O60284 1047 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 LYPLA2O95372 231 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 DNAJB1P25685 340 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 PHKA2P46019 1235 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 RBM25P49756 843 aaKnown RBP21.14■□□□□ 0.97
CLN6-213ENST00000636212 NDUFV1P49821 464 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 NCBP1Q09161 790 aaKnown RBP21.14■□□□□ 0.97
CLN6-213ENST00000636212 LAMTOR4Q0VGL1 99 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 ORC2Q13416 577 aaPredicted RBP21.14■□□□□ 0.97
CLN6-213ENST00000636212 CAMK1Q14012 370 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 TFDP1Q14186 410 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 MXD4Q14582 209 aaPredicted RBP21.14■□□□□ 0.97
CLN6-213ENST00000636212 ZNF579Q8NAF0 562 aaKnown RBP21.14■□□□□ 0.97
CLN6-213ENST00000636212 HELQQ8TDG4 1101 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 PGBD4Q96DM1 585 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 TRAIPQ9BWF2 469 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 NOL7Q9UMY1 257 aaKnown RBP21.14■□□□□ 0.97
CLN6-213ENST00000636212 LZTS1Q9Y250 596 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 KIF3AQ9Y496 699 aa21.14■□□□□ 0.97
CLN6-213ENST00000636212 IL9P15248 144 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 SSTR3P32745 418 aaPredicted RBP21.13■□□□□ 0.97
CLN6-213ENST00000636212 RABEP1Q15276 862 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 CTC1Q2NKJ3 1217 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 KCNT2Q6UVM3 1135 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 ERMNQ8TAM6 284 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 MTMR9Q96QG7 549 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 HSD17B14Q9BPX1 270 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 TLE6Q9H808 572 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 IFT122Q9HBG6 1241 aa21.13■□□□□ 0.97
CLN6-213ENST00000636212 DGAT1O75907 488 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 ERLIN2O94905 339 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 IRS1P35568 1242 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 NRIP1P48552 1158 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 PLCB3Q01970 1234 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 ADAM15Q13444 863 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 BMS1Q14692 1282 aaKnown RBP21.12■□□□□ 0.97
CLN6-213ENST00000636212 CLLU1OSQ5K130 101 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 GLB1LQ6UWU2 654 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 RBM23Q86U06 439 aaKnown RBP21.12■□□□□ 0.97
CLN6-213ENST00000636212 ZNF598Q86UK7 904 aaKnown RBP21.12■□□□□ 0.97
CLN6-213ENST00000636212 FERMT3Q86UX7 667 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 FAM178BQ8IXR5 827 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 EFHBQ8N7U6 833 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 RNF149Q8NC42 400 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 FBXO18Q8NFZ0 1043 aa21.12■□□□□ 0.97
CLN6-213ENST00000636212 MRPS27Q92552 414 aaKnown RBP21.12■□□□□ 0.97
CLN6-213ENST00000636212 C1QTNF1Q9BXJ1 281 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms