RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ALDH5A1P51649 535 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-203ENST00000563226 PRKCEQ02156 737 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 PPP2R5AQ15172 486 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 IWS1Q96ST2 819 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 PAGR1Q9BTK6 254 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 SPATC1LQ9H0A9 340 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 FBXL5Q9UKA1 691 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 SAR1BQ9Y6B6 198 aa20.87■□□□□ 0.93
SMPD3-203ENST00000563226 SPDYE4A6NLX3 237 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 CCDC169A6NNP5 214 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 PPATQ06203 517 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 MYBPC2Q14324 1141 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 STXBP2Q15833 593 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 CYFIP1Q7L576 1253 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 GPR161Q8N6U8 529 aaKnown RBP20.86■□□□□ 0.93
SMPD3-203ENST00000563226 TMEM161BQ8NDZ6 487 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 DNERQ8NFT8 737 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 SEPT9Q9UHD8 586 aaPredicted RBP20.86■□□□□ 0.93
SMPD3-203ENST00000563226 PFASO15067 1338 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 LRRC37A2A6NM11 1700 aa20.86■□□□□ 0.93
SMPD3-203ENST00000563226 CNMDO75829 334 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 SEPT14Q6ZU15 432 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 OTUD6AQ7L8S5 288 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 NCAPG2Q86XI2 1143 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 C12orf56Q8IXR9 622 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 PACSIN1Q9BY11 444 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 MAF1Q9H063 256 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 HSPBP1Q9NZL4 362 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 ANO9A1A5B4 782 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 SOWAHBA6NEL2 793 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 BUB1O43683 1085 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 TACC1O75410 805 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 EIF3JO75822 258 aaKnown RBP20.85■□□□□ 0.93
SMPD3-203ENST00000563226 MYL7Q01449 175 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 ERO1BQ86YB8 467 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 PROCA1Q8NCQ7 364 aaPredicted RBP20.85■□□□□ 0.93
SMPD3-203ENST00000563226 TRIM58Q8NG06 486 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 PLEKHO2Q8TD55 490 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 PARD6BQ9BYG5 372 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 INTS2Q9H0H0 1204 aaKnown RBP20.85■□□□□ 0.93
SMPD3-203ENST00000563226 ASCC2Q9H1I8 757 aaPredicted RBP20.85■□□□□ 0.93
SMPD3-203ENST00000563226 XPNPEP1Q9NQW7 623 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 IGSF9BQ9UPX0 1349 aa20.85■□□□□ 0.93
SMPD3-203ENST00000563226 CTAGE15A4D2H0 777 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 SPDYE5A6NIY4 337 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 ANKRD63C9JTQ0 380 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 ZNF185O15231 689 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 SUPT20HL2P0C7V6 817 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 CTAGE8P0CG41 777 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 ICAM3P32942 547 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 IRX3P78415 501 aaPredicted RBP20.84■□□□□ 0.93
SMPD3-203ENST00000563226 TTLL12Q14166 644 aaPredicted RBP20.84■□□□□ 0.93
SMPD3-203ENST00000563226 CTAGE6Q86UF2 777 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 CTAGE4Q8IX94 777 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 ANKRD13AQ8IZ07 590 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 NOA1Q8NC60 698 aaKnown RBP20.84■□□□□ 0.93
SMPD3-203ENST00000563226 TMEM174Q8WUU8 243 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 CAPZA3Q96KX2 299 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 ANKZF1Q9H8Y5 726 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 PDLIM7Q9NR12 457 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 TBX20Q9UMR3 447 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 ADGRA3Q8IWK6 1321 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 ATP4AP20648 1035 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 DMP1Q13316 513 aaPredicted RBP20.84■□□□□ 0.93
SMPD3-203ENST00000563226 C1orf220Q5T0J3 134 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 MIS18BP1Q6P0N0 1132 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 DNAAF5Q86Y56 855 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 XXYLT1Q8NBI6 393 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 MMS19Q96T76 1030 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 FBXO40Q9UH90 709 aa20.84■□□□□ 0.93
SMPD3-203ENST00000563226 EMSYQ7Z589 1322 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 SYNGAP1Q96PV0 1343 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 DENND3A2RUS2 1198 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 GOLGA8IPA6NC78 632 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 GOLGA8JA6NMD2 632 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 LRRN2O75325 713 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 ADRB2P07550 413 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 ADSSP30520 456 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 PRKCIP41743 596 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 PPP3CAQ08209 521 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 KMT5AQ9NQR1 393 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 CYP26B1Q9NR63 512 aa20.83■□□□□ 0.93
SMPD3-203ENST00000563226 DDX41Q9UJV9 622 aaKnown RBP20.83■□□□□ 0.93
SMPD3-203ENST00000563226 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 GFPT2O94808 682 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 KRT13P13646 458 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 KLRC1P26715 233 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 EPHX2P34913 555 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 VAMP7P51809 220 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 MOGSQ13724 837 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 MTERF2Q49AM1 385 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 INTS8Q75QN2 995 aaKnown RBP20.82■□□□□ 0.92
SMPD3-203ENST00000563226 MAP4K3Q8IVH8 894 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 LMO3Q8TAP4 145 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 KIFAP3Q92845 792 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 GPR88Q9GZN0 384 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 TXNRD2Q9NNW7 524 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 DNAJC12Q9UKB3 198 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 JRKLQ9Y4A0 524 aa20.82■□□□□ 0.92
SMPD3-203ENST00000563226 F8VZ95 297 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms