RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 PDIK1LQ8N165 341 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 SYMPKQ92797 1274 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 EDC3Q96F86 508 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 INTS9Q9NV88 658 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 ABCC12Q96J65 1359 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 A0A0D9SFI3 127 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 BTBD18B2RXH4 712 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 MAP3K13O43283 966 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PYGBP11216 843 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 COPB2P35606 906 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ATP1A2P50993 1020 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 GNGT1P63211 74 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PTH1RQ03431 593 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 GRIN1Q05586 938 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 CACNB2Q08289 660 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 LRRC41Q15345 812 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ME3Q16798 604 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PKN3Q6P5Z2 889 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 TMEM179Q6ZVK1 233 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 NT5DC4Q86YG4 428 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 RNF168Q8IYW5 571 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 TRPV6Q9H1D0 765 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 KIF17Q9P2E2 1029 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 CEMIPQ8WUJ3 1361 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 MAFGO15525 162 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 GFPT2O94808 682 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 GH2P01242 217 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 IFNAR2P48551 515 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 SFSWAPQ12872 951 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 ZNF699Q32M78 642 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 RHPN2Q8IUC4 686 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 TRIM48Q8IWZ4 208 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 EEF2KMTQ96G04 330 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 HAUS4Q9H6D7 363 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 RAVER2Q9HCJ3 691 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 GINM1Q9NU53 330 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 AIPL1Q9NZN9 384 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 GCNT4Q9P109 453 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 DBNLQ9UJU6 430 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 CAPN11Q9UMQ6 739 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 SCINQ9Y6U3 715 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 DYNLL1P63167 89 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 GPSM2P81274 684 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 ZBTB17Q13105 803 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 MTMR1Q13613 665 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 LRRC24Q50LG9 513 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 USP17L2Q6R6M4 530 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 UNC5CLQ8IV45 518 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 MCPH1Q8NEM0 835 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 PPHLN1Q8NEY8 458 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 RASGRP4Q8TDF6 673 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 NSUN6Q8TEA1 469 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 SIK2Q9H0K1 926 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 FGFR1OP2Q9NVK5 253 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 ASAP1Q9ULH1 1129 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 MTMR6Q9Y217 621 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 IQANK1A0A1B0GTG1 560 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 ASB14A6NK59 587 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 SYCE1LA8MT33 242 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 USP17L10C9JJH3 530 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 KDM1AO60341 852 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 SASH1O94885 1247 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 GPC3P51654 580 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 GUCY2DQ02846 1103 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 HIF1AQ16665 826 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 PYROXD1Q8WU10 500 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 PAWRQ96IZ0 340 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 SPATA33Q96N06 139 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 TUBGCP2Q9BSJ2 902 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 C2orf40Q9H1Z8 148 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 ASNSD1Q9NWL6 643 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 GTSE1Q9NYZ3 720 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 SH3BP1Q9Y3L3 701 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 ARHGAP23Q9P227 1491 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 FGAP02671 866 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 GRIK1P39086 918 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 PTPN12Q05209 780 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 GRAPQ13588 217 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 CTTNQ14247 550 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 C10orf76Q5T2E6 689 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 MFSD4BQ5TF39 518 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 MMS22LQ6ZRQ5 1243 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 SPATA2LQ8IUW3 424 aaPredicted RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 GRAPLQ8TC17 118 aaPredicted RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 TRIM55Q9BYV6 548 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 XPO4Q9C0E2 1151 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 ZBTB1Q9Y2K1 713 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 RPAP1Q9BWH6 1393 aaPredicted RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 PDIA3P30101 505 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 AKT1P31749 480 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 SNAP25P60880 206 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 FKBP3Q00688 224 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 KRT17Q04695 432 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 POU5F1BQ06416 359 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
USP38-203ENST00000511739 PDCLQ13371 301 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 ZNF827Q17R98 1081 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 TEX9Q8N6V9 391 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 OR6J1Q8NGC5 347 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms