RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PHEXP78562 749 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 DYNC1I2Q13409 638 aaKnown RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 MAP3K21Q5TCX8 1036 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 THOC7Q6I9Y2 204 aaKnown RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 PPP1R18Q6NYC8 613 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 VPS54Q9P1Q0 977 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 IP6K2Q9UHH9 426 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 EZRP15311 586 aaKnown RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 OAS2P29728 719 aaKnown RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 CLCN2P51788 898 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ADCY7P51828 1080 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 TUBA1BP68363 451 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 PDE4DQ08499 809 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 BOLA3Q53S33 107 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 TMCO3Q6UWJ1 677 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 MAMDC4Q6UXC1 1216 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 TUBA1AQ71U36 451 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 FBXO16Q8IX29 292 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 DNERQ8NFT8 737 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ZMAT2Q96NC0 199 aaKnown RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 DEFB118Q96PH6 123 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 PCDH18Q9HCL0 1135 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 SH2B1Q9NRF2 756 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ADAM21Q9UKJ8 722 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 DNAH12Q6ZR08 3092 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 KIAA0100Q14667 2235 aaKnown RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 P4HA2O15460 535 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 SLC26A4O43511 780 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 JAK2O60674 1132 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 CLASP2O75122 1294 aaKnown RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 SNAI1O95863 264 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 ALOX15P16050 662 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 INHBCP55103 352 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 ZBTB17Q13105 803 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 KCNB1Q14721 858 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 NAA25Q14CX7 972 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 SH2D4BQ5SQS7 431 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 TTC39CQ8N584 583 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 TRPV1Q8NER1 839 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 CCDC148Q8NFR7 591 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 NSUN6Q8TEA1 469 aaKnown RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 PPP2R3CQ969Q6 453 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 NAP1L4Q99733 375 aaKnown RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 PXMP2Q9NR77 195 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 KIAA1522Q9P206 1035 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 ORC3Q9UBD5 711 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 LUC7L2Q9Y383 392 aaKnown RBP12.63□□□□□ -0.39
BRCA1-222ENST00000493919 SQORQ9Y6N5 450 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 STK36Q9NRP7 1315 aa12.63□□□□□ -0.39
BRCA1-222ENST00000493919 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 MEIS2O14770 477 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 CAVIN2O95810 425 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 IGBP1P78318 339 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 GHRHRQ02643 423 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 CAPRIN2Q6IMN6 1127 aaKnown RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 SUN5Q8TC36 379 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 ACMSDQ8TDX5 336 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 ABHD16BQ9H3Z7 469 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 XPO7Q9UIA9 1087 aaKnown RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 CARD8Q9Y2G2 431 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 ATP9BO43861 1147 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 IGHA2P01877 340 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 MYCLP12524 364 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 S100A5P33763 92 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 ACVR2BQ13705 512 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 RASA2Q15283 850 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 LONRF1Q17RB8 773 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 CCSAPQ6IQ19 270 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 NANOGNBQ7Z5D8 188 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 U2AF1L4Q8WU68 220 aaKnown RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 LENG1Q96BZ8 264 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 C6orf50Q9HD87 102 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 PAK6Q9NQU5 681 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-222ENST00000493919 LZTS1Q9Y250 596 aa12.62□□□□□ -0.39
BRCA1-222ENST00000493919 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
BRCA1-222ENST00000493919 B4DLN1 442 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 PIK3CDO00329 1044 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 SEPT4O43236 478 aa12.61□□□□□ -0.39
BRCA1-222ENST00000493919 ZNF865P0CJ78 1059 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms