RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
NEK3-209ENST00000618856 IFT122Q9HBG6 1241 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 RGS18Q9NS28 235 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 LRWD1Q9UFC0 647 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 GPR182O15218 404 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 SLC26A4O43511 780 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 MGEA5O60502 916 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 DGAT1O75907 488 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 BMP15O95972 392 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 AMHP03971 560 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 KCNJ6P48051 423 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 RABGGTBP53611 331 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 PAK2Q13177 524 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 TMEM266Q2M3C6 531 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 XKR9Q5GH70 373 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 HAUS3Q68CZ6 603 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 Q7L0L9 218 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 TRMT1LQ7Z2T5 733 aaKnown RBP9.21□□□□□ -0.94
NEK3-209ENST00000618856 IFNLR1Q8IU57 520 aaPredicted RBP9.21□□□□□ -0.94
NEK3-209ENST00000618856 DEFB123Q8N688 67 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 ZNF689Q96CS4 500 aaPredicted RBP9.21□□□□□ -0.94
NEK3-209ENST00000618856 AK8Q96MA6 479 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 MAP7D2Q96T17 732 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 RAD9AQ99638 391 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 OSMRQ99650 979 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 TRAIPQ9BWF2 469 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 NFKBIZQ9BYH8 718 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 RAB34Q9BZG1 259 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
NEK3-209ENST00000618856 SUGCTQ9HAC7 445 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 SUCLA2Q9P2R7 463 aaPredicted RBP9.21□□□□□ -0.94
NEK3-209ENST00000618856 MSRAQ9UJ68 235 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 ST3GAL5Q9UNP4 418 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 LOXHD1Q8IVV2 1947 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 TTC3P53804 2025 aa9.21□□□□□ -0.94
NEK3-209ENST00000618856 REV3LO60673 3130 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 VPS37CA5D8V6 355 aaPredicted RBP9.2□□□□□ -0.94
NEK3-209ENST00000618856 C9IYK1 514 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 ASAP2O43150 1006 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 RPS6KA5O75582 802 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 ARHGEF15O94989 841 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 LINC00271P0C7V0 271 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 MYOGP15173 224 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 POU3F3P20264 500 aaPredicted RBP9.2□□□□□ -0.94
NEK3-209ENST00000618856 DNM2P50570 870 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 POLGP54098 1239 aaPredicted RBP9.2□□□□□ -0.94
NEK3-209ENST00000618856 TAP1Q03518 808 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 EMC2Q15006 297 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 SF3A1Q15459 793 aaKnown RBP9.2□□□□□ -0.94
NEK3-209ENST00000618856 ODR4Q5SWX8 454 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 ZNF697Q5TEC3 545 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 POTEGQ6S5H5 508 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 TMCO2Q7Z6W1 182 aaPredicted RBP9.2□□□□□ -0.94
NEK3-209ENST00000618856 FERMT3Q86UX7 667 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 PIGOQ8TEQ8 1089 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 TCP11Q8WWU5 503 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 PRPF31Q8WWY3 499 aaKnown RBP9.2□□□□□ -0.94
NEK3-209ENST00000618856 PNMA5Q96PV4 448 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 MTRQ99707 1265 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 NKX2-4Q9H2Z4 354 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 ZNF576Q9H609 170 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 AKT3Q9Y243 479 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 INSL6Q9Y581 213 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 COL4A3BPQ9Y5P4 624 aa9.2□□□□□ -0.94
NEK3-209ENST00000618856 A0A087WZ62 844 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 LCHNA4D1U4 455 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 PP2D1A8MPX8 630 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 TLL1O43897 1013 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 DGKIO75912 1065 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 CA3P07451 260 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 CYP11B2P19099 503 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 NASPP49321 788 aaPredicted RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 SARSP49591 514 aaKnown RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 GRIN1Q05586 938 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 LAMTOR4Q0VGL1 99 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 MXD4Q14582 209 aaPredicted RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 GRIN2CQ14957 1233 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 PCBP1Q15365 356 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEK3-209ENST00000618856 TMEM119Q4V9L6 283 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 FAM173BQ6P4H8 233 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 SLC24A5Q71RS6 500 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 RHPN2Q8IUC4 686 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 KSR1Q8IVT5 923 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 SNX29Q8TEQ0 813 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 PSPC1Q8WXF1 523 aaKnown RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 TMEM143Q96AN5 459 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 CDX2Q99626 313 aaPredicted RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 FDXACB1Q9BRP7 624 aaPredicted RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 GCOM2Q9BZD3 368 aaPredicted RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 ELAC1Q9H777 363 aaKnown RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 ATP6V0A4Q9HBG4 840 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 CHST12Q9NRB3 414 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 C1orf112Q9NSG2 853 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 STXBP5LQ9Y2K9 1186 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 SRPRBQ9Y5M8 271 aaKnown RBP9.19□□□□□ -0.94
NEK3-209ENST00000618856 CLIC4Q9Y696 253 aa9.19□□□□□ -0.94
NEK3-209ENST00000618856 A0A087WWV3 80 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 LINC01553A4QN01 128 aa9.18□□□□□ -0.94
NEK3-209ENST00000618856 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms