RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	MYL7	Q01449	175 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	MTMR3	Q13615	1198 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	DAAM2	Q86T65	1068 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	KLHL7	Q8IXQ5	586 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	IQCK	Q8N0W5	287 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	RASGEF1C	Q8N431	466 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	CASKIN2	Q8WXE0	1202 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	HINFP	Q9BQA5	517 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	INTS2	Q9H0H0	1204 aa	Known RBP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	DEFB129	Q9H1M3	183 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	APEX2	Q9UBZ4	518 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	DNAJC12	Q9UKB3	198 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	SPDYE2B	A6NHP3	402 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	SFI1	A8K8P3	1242 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	KRIT1	O00522	736 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	EIF3H	O15372	352 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	3e-11	■■□□□ 12.7
PKM-222	ENST00000568883	P4HA2	O15460	535 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	PPIP5K2	O43314	1243 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	EXOC3	O60645	756 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	APBA3	O96018	575 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	SPDYE6	P0CI01	402 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	ECE1	P42892	770 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	JAG1	P78504	1218 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	MRPS25	P82663	173 aa	Known RBP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	SLC20A2	Q08357	652 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	NIPA1	Q7RTP0	329 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	OGFOD1	Q8N543	542 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	LARS	Q9P2J5	1176 aa	Known RBP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	NOC2L	Q9Y3T9	749 aa	Known RBP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	IPO5	O00410	1097 aa	Known RBP	13.77	□□□□□ -0.21
PKM-222	ENST00000568883	TBC1D12	O60347	775 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	SNRPF	P62306	86 aa	Known RBP	13.77	□□□□□ -0.21
PKM-222	ENST00000568883	GNGT1	P63211	74 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	KCNA1	Q09470	495 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	BFSP1	Q12934	665 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	DRAP1	Q14919	205 aa	Predicted RBP	13.77	□□□□□ -0.21
PKM-222	ENST00000568883	DLGAP5	Q15398	846 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	FKBP1C	Q5VVH2	108 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	INTS8	Q75QN2	995 aa	Known RBP	13.77	□□□□□ -0.21
PKM-222	ENST00000568883	SLC17A8	Q8NDX2	589 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	SLC30A5	Q8TAD4	765 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	TMEM174	Q8WUU8	243 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	LXN	Q9BS40	222 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	TIPIN	Q9BVW5	301 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	UNC45A	Q9H3U1	944 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	STXBP5L	Q9Y2K9	1186 aa		13.77	□□□□□ -0.21
PKM-222	ENST00000568883	GOLGA6L10	A0A0M3HER8	536 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	ESYT3	A0FGR9	886 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	TCP10L2	B9ZVM9	353 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	EBAG9	O00559	213 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	TNFAIP3	P21580	790 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	CYP2J2	P51589	502 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	GALC	P54803	685 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	RRP1B	Q14684	758 aa	Known RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	TTMP	Q5BVD1	217 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	EMC10	Q5UCC4	262 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	KDM7A	Q6ZMT4	941 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	NT5DC3	Q86UY8	548 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	MCF2L2	Q86YR7	1114 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	ARFGAP2	Q8N6H7	521 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	METTL13	Q8N6R0	699 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	HES6	Q96HZ4	224 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	FIZ1	Q96SL8	496 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	IWS1	Q96ST2	819 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	MXRA8	Q9BRK3	442 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	SART1	O43290	800 aa	Known RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	P4HB	P07237	508 aa	Known RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	GUCY2F	P51841	1108 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	RNASE9	P60153	205 aa	Known RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	MSL1	Q68DK7	614 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	B3GNT9	Q6UX72	402 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	MIER3	Q7Z3K6	550 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	LDHD	Q86WU2	507 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	SPATS2	Q86XZ4	545 aa	Known RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	RHOT2	Q8IXI1	618 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	ACER1	Q8TDN7	264 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	C7orf43	Q8WVR3	580 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	FAM114A2	Q9NRY5	505 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	ZNF70	Q9UC06	446 aa	Predicted RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	PNMA2	Q9UL42	364 aa		13.76	□□□□□ -0.21
PKM-222	ENST00000568883	UTP11	Q9Y3A2	253 aa	Known RBP	13.76	□□□□□ -0.21
PKM-222	ENST00000568883	PFAS	O15067	1338 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	ANKRD62	A6NC57	917 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883		K7ENM7	598 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	MAPK13	O15264	365 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	HIP1R	O75146	1068 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	ERLIN2	O94905	339 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	FAM153B	P0C7A2	387 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	TAL1	P17542	331 aa	Predicted RBP	13.75	□□□□□ -0.21
PKM-222	ENST00000568883	KIF22	Q14807	665 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	FAM153C	Q494X1	144 aa		13.75	□□□□□ -0.21
PKM-222	ENST00000568883	GJB7	Q6PEY0	223 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms